Flavobacterium panici: NLJ00_11385
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Entry
NLJ00_11385 CDS
T08520
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
fpb
Flavobacterium panici
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
AAA_2
Mg_chelatase
HTH_30
AAA_16
AAA_7
AAA
HTH_11
HTH_22
HTH_28
bpMoxR
HTH_50
HTH_29
LZ_Tnp_IS481
AAA_18
AAA_19
nSTAND3
AAA_22
HTH_17
Motif
Other DBs
NCBI-ProteinID:
UUF16695
LinkDB
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Position
complement(2687833..2689203)
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AA seq
456 aa
AA seq
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MIDGKILIIDDNKSVLSALEILLQFEYKHIETLSNPNQISSFKNLIDFDIVLLDMNFLAG
VNNGNEGLYWLKEIKKKAPDISVIMITSYGAIDLAVDALKAGASDFILKPWNNDKLLSTI
KSVYLLKKSLKERNKPKTNEKGLKEINDQNESSIIGNSKELLSLLHLTQKVAKTDVSVLI
TGENGTGKEVIAQELHRLSNRKNEIFISVDMGSISESLFESELFGHMKGAFTDAKQDRIG
KFEAANGGTLFLDEIGNLSLQLQAKLLSVLQNRIIVRVGSNKPIPVNIRLVCATNCNLHQ
MVADGVFREDLLYRINTIHLEVPSLRDRDKDILLLADFYLKKMSSKYDRPDMKIDVAAQE
KLMAYSWPGNVRELQHTIERAIILCESNVLKPDDFLLINKSSASPNTQPNTLDEMEEIMI
NRVLNENNSNLSAAANQLGVSRQTLYNKIKKRKSNG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgattgacggaaaaattttgataattgatgataacaaaagtgtattgagtgctttagaa
attctcttgcaatttgaatacaagcacattgaaacgttatctaatccaaatcaaatttca
tcttttaaaaatttaattgattttgatattgtcttattagatatgaattttttagccggt
gttaataacggaaatgaagggctgtattggctaaaagagataaaaaagaaggctccagac
atttcggttattatgattacatcttatggagctatcgatttagctgtagatgctttgaag
gccggggcttctgactttatacttaaaccctggaataacgataaacttttatccaccata
aaatcagtttatttattaaaaaaatctttaaaagaaagaaataaaccaaaaacgaatgaa
aaaggtttaaaagagattaatgatcagaatgaaagctctattattggtaattctaaagaa
ttattatcccttcttcatctaactcaaaaagtagcaaagactgatgttagtgttttaata
accggtgaaaatggtaccggaaaagaggtaattgctcaagaactgcatagactttcgaac
agaaaaaatgaaatatttatctcggtagatatgggttctatttctgagtcactttttgaa
agtgaactttttggacatatgaaaggggcatttacagatgccaaacaggacagaattggt
aaatttgaagctgcaaatggaggtacattatttttagatgaaattggaaacctgtcactt
caattacaagctaaacttctttcggtactacaaaacagaattattgttagagtgggctct
aataagcctattcctgttaacattcgcttagtttgtgcgacaaactgcaatctgcatcaa
atggttgccgacggtgtttttagagaagatttactttatagaatcaacactattcatctt
gaagttccttcattgcgagatcgtgataaagacattttacttttggcagatttttattta
aaaaaaatgtcttctaaatacgacagaccagacatgaaaattgatgttgcagctcaggaa
aaattaatggcttattcctggccagggaatgtcagggaattacagcataccattgaaaga
gctataattttatgcgaaagcaatgttttaaaaccagatgactttttgttaatcaataaa
tcctcggcatctccaaacactcagccaaatactttggacgaaatggaagagataatgata
aacagggttttaaatgaaaacaattctaatttaagtgctgctgccaaccaactaggtgtt
tcaaggcaaaccttgtacaataaaataaagaaaagaaaaagcaatggttaa
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