Flavobacterium panici: NLJ00_11705
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Entry
NLJ00_11705 CDS
T08520
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fpb
Flavobacterium panici
Pathway
fpb00300
Lysine biosynthesis
fpb00470
D-Amino acid metabolism
fpb01100
Metabolic pathways
fpb01110
Biosynthesis of secondary metabolites
fpb01120
Microbial metabolism in diverse environments
fpb01230
Biosynthesis of amino acids
Module
fpb_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NLJ00_11705 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NLJ00_11705 (lysA)
Enzymes [BR:
fpb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NLJ00_11705 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
MC7
Motif
Other DBs
NCBI-ProteinID:
UUF16756
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All DBs
Position
complement(2756335..2757558)
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AA seq
407 aa
AA seq
DB search
MQAKDLLQLADQFGSPLYVYDAEKIQSQYNRLTKAFSKVENLRVNYAMKALSNVAILQLL
KNMGSGLDTVSIQEVQLGLHAGYEPERIFFTPNGVSLEEIEEVAAMGVQINIDNLSILEQ
FGTKHPHIPVCIRINPHVMAGGNANISVGHIDSKFGISVHQIPHILRIVENTKMSIVGIH
MHTGSDILDIEVFLYAAEILFDTAKHFKDLQFLDFGSGFKVPYKKDDIETDIEELGKKLS
KRFNSFCAEYGRDLTLIFEPGKFLVSEAGFFLAKVNVVKQTTSTVFAGIDSGFNHLIRPM
FYGSQHYIENISNPKGKERFYSVVGYICETDTFANNRRISEITEGDILAFRNAGAYCFSM
SSNYNSRYKPAEVLWMNGQGILIRAHETFEDLLKNQIPLPQEVAATV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaaaagatttactgcagttagcagaccaatttggaagtccattatatgtttat
gatgccgaaaaaatccaatctcagtacaatagattaactaaagctttctctaaggtagaa
aacttaagagttaattacgccatgaaggcattgtcaaacgttgcgattcttcagttatta
aagaacatggggtctggcttagacactgtatcaattcaggaagttcaattaggacttcat
gctggctatgaacccgaaagaattttctttacaccaaacggagtttctcttgaagaaatt
gaagaagttgccgcaatgggtgtacaaatcaatatcgataatttatctattttagaacaa
ttcggaacaaaacatcctcatattccggtatgtattcgtattaatccacacgtaatggcg
ggcggaaatgctaatatttcagtaggacatatcgatagtaaattcgggatttctgttcac
cagattccgcatatattgcgaattgttgaaaatacaaaaatgagcattgttggaattcac
atgcacacaggatctgatattttagatatcgaagtattcttgtatgcagctgaaatcttg
tttgatactgcaaaacacttcaaagatttacaattcttagattttggaagcggattcaaa
gtgccttacaaaaaagacgatatcgaaaccgacatcgaagaattaggtaaaaaattatca
aaaagattcaactctttctgtgcagaatatggtagagacttaaccttgattttcgaacct
ggaaaattccttgtgagcgaagcaggtttcttcttagcaaaagtaaacgtagtaaaacaa
acaacttcaaccgttttcgccggaatcgacagcggtttcaaccacttaatccgtccaatg
ttttacggttcacaacattatatagaaaacatctctaatccaaaaggaaaagagcgtttt
tactccgttgtaggatacatttgcgaaactgatacttttgccaacaaccgcagaatctca
gaaattaccgaaggcgatattcttgctttcagaaacgccggagcatattgtttttcaatg
tcttcaaactacaattcaagatacaaaccagccgaagttctatggatgaacggacaagga
atcttgattcgtgcacacgaaacattcgaagatttacttaaaaatcaaattccgttaccg
caagaagttgctgcaacagtttaa
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