Flavobacterium panici: NLJ00_12185
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Entry
NLJ00_12185 CDS
T08520
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
fpb
Flavobacterium panici
Pathway
fpb02024
Quorum sensing
fpb03060
Protein export
fpb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NLJ00_12185 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NLJ00_12185 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NLJ00_12185 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fpb02044
]
NLJ00_12185 (secDF)
Secretion system [BR:
fpb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NLJ00_12185 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
UUF16850
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All DBs
Position
2863273..2866263
Genome browser
AA seq
996 aa
AA seq
DB search
MQNKGLIKFFAILFALVSIYQLSFTFVANNVKSEAKAFAGDNPDKELKYLDSIGKEKVFN
LGFTDFTYNEVKNKQLNKGLDLEGGINVILQISVKDVLKGLANNSKNPVFNKSLADATAN
LEGNKTYLNKFFEAFEANSNGNTKLASPDIFANRSLQGEGGIDFQMTDAQAQKVIKRKVD
ESIESAYKVLRERIDKFGVTQPNIQKLGETGRILVELPGAKDVDRIKKLLGGKAQLEFWE
TYKIEEVGNFLVAANEALKKTEVKKVETKTVAKDSLNALLTDAKDSVDTKKGNNPLFDKM
ITQGGGPVLGYFATKDTATINAYFKRPEIRILLAADQHYAKFVWSKPTTVKDPKAKDLAS
AKDIEAVELYALKGNRDNVPAMSGGVVTDAKDTFDQMGKPAVSMQMNSQGAKVWEELTGR
AFSQKGYIAIVLDNIVYSAPGVTSGPIAGGRSEITGSFDVAETKDLANVLNAGKLPASAD
IIQSTVVGPSLGQAAIDAGTISSVLGFLLVCVWMVFYYGKAGWYANLALLLNLLFLFGIM
ASFGFVLTLPGIAGIVLTLGTAVDANIIIYERAKEELREGKSLSEAVAASYGWHGAMRSI
IDANVTHVLTGAILFIFGTGPIKGFALTLLIGIVTSLFTSIFIARIFIDRNIAGKGDLTF
STNITKNWFTNFHFDFIKIKKFTYIFSSIVVVVSLISIFFVNGLDEGVDFVGGRTFQVKF
EKPIDATVVSDELSAAFGTPVEAKILGDDDQLKITTKYKIKEDGVAIDEEVNQKLYKGLI
KYFPNTTYDKFINSFDGKKVGVLQASKVGASISEDIKTNSYWAVLGAMAVIFLYLMISFR
KWQYSLGAIAAVAHDVIFVLGIYSLCYKFMPFHMEMDQHFIAAILTVIGYSMNDTVIVFD
RIREFIIGNRKGTFEDIVNASINTTLSRTLNTSLMMIIVLLTMFIFGGESIRGFIFAMLI
GIIVGTYSSLFIATPVLVDSISSADKHTIEDKHNKA
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgcagaataaaggacttattaaatttttcgcaattctatttgcattggtaagtatttac
caattatctttcacttttgtggcaaataatgtcaaaagtgaggctaaagcttttgcagga
gataatcctgataaagagctaaaatatttagattctattggtaaagaaaaagtgtttaat
cttggttttactgacttcacttataatgaagtaaaaaacaaacaattaaataaaggtctt
gacttagaaggaggaatcaacgtaattcttcaaatctctgttaaagacgttttaaaagga
ttagcaaacaattctaaaaacccggtttttaataaatcattagctgatgcaactgcaaat
ttagaaggaaataagacctatttaaataaattctttgaagcttttgaagcaaactcaaac
ggaaatacaaaattggcttcgccagatatctttgcaaacagaagtttacaaggtgaaggt
ggaattgatttccaaatgacagatgcacaagctcaaaaagtaatcaaaagaaaagttgat
gagtctatcgaaagtgcttacaaagtattaagagagcgtatcgacaaatttggtgtaaca
caaccaaacatccaaaaattaggagaaactggaagaatcttagtggagcttccaggtgct
aaagatgttgacaggattaaaaaattattaggtgggaaagctcaattagagttttgggaa
acttataaaattgaagaagttggtaacttcttagttgctgctaacgaagctttaaagaaa
actgaagttaaaaaagtagaaactaaaacagttgctaaagattcattgaatgctttatta
actgatgctaaagattcagttgatactaaaaaaggaaacaatcctttatttgacaaaatg
attactcaaggcggcggtccggttttaggatacttcgctacaaaagatactgcaacaatc
aatgcttatttcaaaagaccagaaatcagaattttattggctgctgaccaacattatgca
aaatttgtatggagtaaaccaacaactgtaaaagatcctaaagcaaaagatttagcaagc
gctaaagatattgaagcagttgaattatatgctttaaaaggtaacagagataacgtacca
gctatgagtggtggtgttgtaactgatgcaaaagatacttttgaccaaatgggtaaacca
gctgtttctatgcaaatgaacagccagggagctaaagtttgggaagaactaacaggaaga
gctttctctcaaaaaggttatatcgctattgtattagataacatcgtatattctgcacca
ggtgttacaagtggtcctattgctggaggaagatctgaaattacaggttcttttgatgtt
gctgaaactaaagatttagctaacgtattaaatgcaggtaaattaccagcttctgcagac
attattcaatctactgttgttggaccatctttaggtcaggctgcaattgatgcaggaaca
atttcatctgtattaggattcttattagtttgtgtttggatggtattctattatggtaaa
gctggatggtatgcaaaccttgctttattattgaacttacttttcttattcggaattatg
gcaagttttggttttgtattaacattaccaggtattgcaggtatcgtattaacattaggt
actgcggtagatgccaacattattatatatgaaagagcaaaagaggaattacgtgaaggt
aaatcattatctgaagctgtagctgcatcttacggatggcacggtgcaatgcgttctatt
attgatgcaaacgttactcacgttttaactggagcgatcttatttatctttggaacagga
ccaatcaaaggttttgctttaacattacttattggtatcgtaacttcattgtttacttct
atctttattgctagaattttcattgacagaaacattgctggaaaaggggatttaactttc
tctacaaacattactaaaaactggtttactaatttccactttgactttattaaaatcaaa
aaattcacttatatcttctcttcaattgtagtagttgtaagtttaatttctatcttcttc
gttaacggattagatgaaggtgttgattttgttggaggaagaactttccaggttaaattt
gaaaaaccaattgatgcaacagtagtttcagatgaattatctgctgcttttggaactccg
gttgaagctaaaattttaggtgatgatgatcagttgaaaatcacaactaaatacaaaatt
aaagaagatggtgttgctatcgatgaagaagtaaaccaaaagttatataaaggattaatt
aaatatttcccaaatacaacttacgataaattcatcaactcttttgacggtaaaaaagtt
ggagtattacaagcttctaaagttggagcttctatctctgaagatattaaaactaactca
tactgggcagttcttggagcaatggcagttattttcttatacttaatgatctctttccgt
aaatggcagtattcattaggtgcgattgcagctgttgcgcatgacgtaatcttcgtatta
ggaatttactctttatgttataaattcatgccattccacatggaaatggaccagcacttt
attgctgcgattcttaccgtaattggttactctatgaacgatactgtaattgtatttgat
agaattagagaatttatcatcggaaaccgtaaaggtactttcgaagatatcgtaaacgct
tctattaacactacattatctagaacattgaatacttcattaatgatgatcattgtatta
ttaacgatgtttatctttggtggagaatcaatcagagggtttatctttgccatgttaatt
ggtattattgtgggaacttattcatcattatttattgctacaccagtattggttgactcg
atttcttctgctgataaacacacaatcgaagacaagcataacaaagcataa
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