KEGG   Flavobacterium panici: NLJ00_13270
Entry
NLJ00_13270       CDS       T08520                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fpb  Flavobacterium panici
Pathway
fpb03030  DNA replication
fpb03430  Mismatch repair
fpb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NLJ00_13270
   03430 Mismatch repair
    NLJ00_13270
   03440 Homologous recombination
    NLJ00_13270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpb03032]
    NLJ00_13270
   03400 DNA repair and recombination proteins [BR:fpb03400]
    NLJ00_13270
Enzymes [BR:fpb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NLJ00_13270
DNA replication proteins [BR:fpb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NLJ00_13270
DNA repair and recombination proteins [BR:fpb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NLJ00_13270
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like DEDDh_C
Other DBs
NCBI-ProteinID: UUF12219
LinkDB
Position
complement(3110311..3110937)
AA seq 208 aa
MGLFNFWKKEENLFDESITIEETRFVVLDTETTGFDYENDRILCIGALVLQNGVISVQNS
FEIYLQQDHYDKSTAQIHGILKDLLIKRPSELEALEQFLSFLGDSIIVAHHTIFDVTMIN
KALERNNLPQLTNKTLDTAYLYKRTLIKSHLFERKDHYTLDDLADKFDISKKDRHTALGD
AYITAISFLKIVKKLREKKEVNLNSLFK
NT seq 627 nt   +upstreamnt  +downstreamnt
atgggtttatttaatttttggaaaaaggaagaaaatctattcgatgaaagtatcacaatc
gaagaaacccgttttgttgttctggatactgaaacgacgggattcgattatgaaaatgat
cgtattttatgtattggcgctctggttcttcaaaacggagtgatctcggttcaaaatagt
tttgaaatttatcttcaacaggatcattatgataaatccacagctcaaattcatggtatt
ttaaaagacttacttattaagcgtccgtctgaattagaagctttagaacaatttttatct
tttcttggagattcaattatcgttgcgcatcataccatttttgatgttacaatgattaat
aaagcgctggaaagaaataatttacctcaacttactaacaaaactttagacacagcttat
ttatacaaaagaactttaattaaatcgcatttgtttgaacgaaaagatcattacactctt
gatgatcttgcagataagtttgatatttcgaaaaaagatcgtcatacggctttgggcgat
gcttatattactgctatttcatttttaaaaattgtaaagaaattgagagagaagaaagag
gttaatttgaattctctatttaaatag

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