Flavobacterium panici: NLJ00_13330
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Entry
NLJ00_13330 CDS
T08520
Name
(GenBank) THUMP domain-containing protein
KO
K25137
23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.173
]
Organism
fpb
Flavobacterium panici
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fpb03009
]
NLJ00_13330
Enzymes [BR:
fpb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
NLJ00_13330
Ribosome biogenesis [BR:
fpb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NLJ00_13330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
THUMP
RlmL_1st
MTS
Methyltransf_31
MmeI_Mtase
DUF2063
Motif
Other DBs
NCBI-ProteinID:
UUF12231
LinkDB
All DBs
Position
3122128..3123291
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AA seq
387 aa
AA seq
DB search
MEENFRMIAKCFFGFEEILEQELRTLGAQDVEKGVRMVSFKGDKGFMYKANLSLRTALKV
LKPIYSFRANNEQALYKGISGINWSKLLNANQTFVIDATVHSTYFNHSEFVSQKCKDAIV
DQFRERTGQRPSIDKQYPDLRINVHIDKDQVSVALDTSGNSLHQRGYRTATNIAPINEVL
AAGILLLSGWEGQSHFLDPMCGSGTFLAEAAMIACNIPANINRKEFAFEKWKDWDNDLFD
QIVNSLMKKTKEFHYTIKGFDKAPSAVSKAKDNIRNANLEDYVTIEDNNFFDSEKAVEGK
LHIVFNPPYDERLDIHMEEFYKNIGDTLKKNYPGTNAWFITANLEALKFVGLKPSRKIKL
FNGSLEARLVKYEMYEGSKRTKFQVSE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaattttagaatgatagccaaatgtttttttggctttgaggagatattagaa
caggaattacgtacgcttggggctcaggatgttgaaaaaggagtgcgaatggtgagtttt
aaaggagataaaggttttatgtacaaagctaatttatcgcttagaacggcactaaaagtt
ctaaaacctatttactcttttagagctaataatgaacaggcattatataaaggaatttcg
ggaataaactggtctaaattattgaatgccaaccaaacttttgtgattgatgctacggtg
cattcgacttattttaaccattctgagtttgtttctcaaaaatgtaaagatgcaattgtt
gatcagtttagagaaagaacgggacaaagaccaagtattgataaacaatatccggatttg
agaatcaatgttcatattgataaagatcaggtttcggttgcgttagatacttcagggaat
tcgctgcaccagcgtggttatagaacggcaacgaatattgcgcctataaacgaggttttg
gcagctggaattttattattatcaggctgggaaggacaaagtcactttttagatccaatg
tgcggttctggaacttttcttgccgaagcggcgatgattgcctgtaatattccggcaaat
attaatcgtaaagagtttgcatttgaaaaatggaaagattgggacaatgatttatttgat
cagattgtaaacagtttgatgaagaaaacaaaagaatttcattacactataaaaggtttt
gataaagcgccaagtgcggtaagcaaagctaaagataacatcagaaatgcaaatctggaa
gattacgtaacgattgaagataataacttttttgacagtgaaaaagcggttgaaggaaag
cttcatattgtatttaatccgccgtatgatgagcgtttagatattcatatggaagaattc
tacaaaaacataggcgatactttaaagaaaaattatccgggaacaaatgcctggtttatt
actgcaaatcttgaagctttaaaatttgttggattaaaaccatcaagaaaaatcaaactt
tttaacggaagccttgaagcacgtttagtaaaatacgaaatgtacgaaggaagtaagaga
acgaaatttcaggtttctgaatag
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