Flavobacterium panici: NLJ00_13795
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Entry
NLJ00_13795 CDS
T08520
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
fpb
Flavobacterium panici
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fpb03009
]
NLJ00_13795 (rimK)
Ribosome biogenesis [BR:
fpb03009
]
Prokaryotic type
ribosomal protein modification factors
NLJ00_13795 (rimK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
Dala_Dala_lig_C
R2K_3
GARS_A
ATP-grasp
ATPgrasp_Ter
D123
Motif
Other DBs
NCBI-ProteinID:
UUF12324
LinkDB
All DBs
Position
complement(3215716..3217086)
Genome browser
AA seq
456 aa
AA seq
DB search
MLQNKVILGSEEWCAFPELGIPTIKARVDSGAKTSAMHAINIAPFIKNDANWVKFDINPI
QNNIKTIIHCEAPLVDKRIVKSSSGFREHRYVIQTNIRIGDSKWPIEMTLTNRDSMGFRM
LLGREAMSGRVLVDPEEKYLLGQPTSEALKELYQNSEKASSGLRIGLLASNPELYSNKRI
MEAGEMRGHEMHFLNIKECYMKLDAKTPEIHYRGGKILNQFDAIIPRIRPSITFYGCALT
RQFEALKVFVLNSATAITQSRDKLYSLQLLLNSGIDIPTTGFANSPLDTDDLIKMVGGSP
LIVKLLEGTQGKGVVLAETKKAAESVINAFKSLNANILVQEFIKEANGKDIRCFVIDGKV
VAAIQREAMPGEFRANIHLGGTASVIKVTSEEKKIAIKAAKAMDLKVAGVDIIRSSKGPL
LLEVNSSPGLEGIEGATNKDIAGEMIKAIEKNFKLS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaaacaaagtcattttaggcagcgaagaatggtgcgcatttccagaacttgga
atcccgacaattaaggctcgtgtcgattctggtgccaaaacttcggcaatgcacgctatc
aacatagctccttttataaaaaatgatgctaattgggttaagtttgacattaatccgatt
caaaataatattaaaaccatcattcattgcgaagctccgcttgttgataaaagaattgta
aaaagttcaagcggttttagagaacaccgttatgtaattcagaccaatattagaattggc
gattcaaaatggccaatcgaaatgactttgaccaatcgtgattcgatgggtttccgtatg
cttttaggacgcgaagccatgagcggacgtgtattggttgatccggaagaaaaatactta
cttggtcaacctacaagtgaagctttaaaagaattatatcaaaactcagaaaaagcaagt
tctggtttacgaattggtcttttagccagtaatccggaattatacagtaataaaagaatc
atggaagcgggcgaaatgcgcggccatgaaatgcattttttgaacatcaaagaatgttac
atgaaactcgatgccaaaactccggagattcattacagaggcggaaaaatcttaaatcag
tttgatgccataattccccgaattagaccaagtataactttttacggctgtgccttaaca
cgtcagtttgaagcattgaaagttttcgttttaaattcagctacagccataacacaatca
agagataaattatattcactgcaattgcttttaaacagcggtattgatatcccaacaact
ggttttgccaattctccgctggatacagacgatttaattaagatggttggaggttctcct
ctaattgtcaaattattagaaggaacgcagggaaaaggtgttgttttagccgaaaccaaa
aaagcggcagaaagtgttatcaatgcttttaaaagtttaaatgcaaatatcttagttcag
gaattcatcaaagaagcaaacggaaaagatattcgctgttttgtaattgacggaaaggtg
gttgctgcgattcagcgtgaagcaatgccgggcgaatttagagcaaatattcaccttggc
ggaacagcatctgtaatcaaagtaacttccgaagagaaaaagatcgcgattaaggccgca
aaagccatggatttaaaagtagctggtgtggatattattcgttcttcaaaagggccatta
ttattggaggtaaactcttctccaggtcttgaaggaatcgaaggcgcaacaaataaagat
attgccggagaaatgatcaaagcaattgaaaagaattttaaattgagttaa
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