Flavobacterium panici: NLJ00_15680
Help
Entry
NLJ00_15680 CDS
T08520
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fpb
Flavobacterium panici
Pathway
fpb03030
DNA replication
fpb03430
Mismatch repair
fpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLJ00_15680
03430 Mismatch repair
NLJ00_15680
03440 Homologous recombination
NLJ00_15680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpb03032
]
NLJ00_15680
03400 DNA repair and recombination proteins [BR:
fpb03400
]
NLJ00_15680
Enzymes [BR:
fpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NLJ00_15680
DNA replication proteins [BR:
fpb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NLJ00_15680
DNA repair and recombination proteins [BR:
fpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NLJ00_15680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
RNase_H_2
DNA_pol_A_exo1
HK_sensor_dom_bact
T5orf172
Motif
Other DBs
NCBI-ProteinID:
UUF12697
LinkDB
All DBs
Position
complement(3742058..3743419)
Genome browser
AA seq
453 aa
AA seq
DB search
MYAILDIETTGGQFNEEGITEIAIYKFDGHEVIDQFISLVNPEIPIQPFVVKLTGINNAM
LRSAPKFYEVAKRIIEITTDCVIVAHNASFDYRILRTEFRRLGYDFEARTLCTVELAKKL
IPEQPSYSLGKLVRALGIPMADRHRASGDAMATTKLFKMLLEKDVEKTIVKDFIKLEIEK
GIAPKFLDLLSQMPTKTGVYYIYNESGTLIYIGKSQNIKKRINQHFTGITTKSKKIQAEV
FTITYDETGSELIALLKESQEVKINRPRYNRSQKKSFFPFALYSEKDANGYLNLKLEKAD
GRKKEITSYASLQEGKNALFKFTAKYHLCQKLTGLYQSKKECFQYKIKECDGACIGEVTP
EIYNLRVQQFISENSFENKSMILIDRGRNVNERSAILIENGTYQGYAYYDLNYQINNIEI
LKNILIPMPHNRDVKNIIQNYIRKSKSLKILHF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaatactagacatagaaaccactggaggacagtttaatgaagaaggaattacc
gaaatcgccatctataaatttgatggacatgaagtaattgaccagttcataagccttgta
aatcctgaaatcccgattcagcctttcgtagtaaaactgaccggaatcaacaatgctatg
ttacgttctgctccaaagttttacgaagttgccaaacgcattatcgaaataactaccgac
tgcgttattgtagcacacaacgcatcttttgactaccgaattttacgaacagaattcaga
cgtttaggctacgattttgaagcccgaacactttgtacagtagaattagcaaaaaaacta
attccagaacaaccatcgtacagtttaggaaaactagtgcgtgccctcggaattccaatg
gccgacagacatcgcgccagcggagacgccatggcaaccacaaagcttttcaaaatgctt
cttgaaaaagacgtcgaaaaaacaatcgtaaaagactttattaaacttgaaatcgaaaaa
ggaattgcaccaaaattcctggatcttttaagccaaatgccaactaaaaccggcgtttat
tacatttataacgaaagcggaactctaatatacattggcaaaagccaaaatatcaaaaag
aggatcaatcagcattttacaggaatcacaaccaaaagtaaaaaaatacaagccgaagtt
tttaccataacgtatgatgaaaccggaagcgaattaatcgcacttttaaaagaaagtcag
gaagtaaaaataaaccgtccgagatacaatcgttcccagaaaaaatcatttttcccattt
gccctttattcagaaaaagatgcgaatggttatttgaatttaaaacttgaaaaagctgac
ggacgtaaaaaagaaattacatcctatgcttctttacaggaaggtaaaaacgcacttttt
aaattcactgcaaaataccatttgtgtcaaaagttaaccggattataccaaagtaaaaaa
gagtgttttcaatataaaataaaagaatgcgacggagcatgtattggcgaagtcactccg
gaaatttataatttgagagtacagcagtttatctctgaaaacagtttcgaaaacaaaagc
atgattttaattgacagaggccgaaatgtaaacgaaagaagcgctattttaatcgaaaac
ggaacctatcaaggttatgcttattacgatcttaactatcagattaacaatattgaaatc
ctaaaaaatatcctaattccaatgccgcataatcgcgatgtaaaaaacataatccaaaat
tacatccgcaagagcaaatctcttaaaattctccatttttaa
DBGET
integrated database retrieval system
