Flavobacterium panici: NLJ00_15885
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Entry
NLJ00_15885 CDS
T08520
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fpb
Flavobacterium panici
Pathway
fpb00260
Glycine, serine and threonine metabolism
fpb00460
Cyanoamino acid metabolism
fpb00630
Glyoxylate and dicarboxylate metabolism
fpb00670
One carbon pool by folate
fpb00680
Methane metabolism
fpb01100
Metabolic pathways
fpb01110
Biosynthesis of secondary metabolites
fpb01120
Microbial metabolism in diverse environments
fpb01200
Carbon metabolism
fpb01230
Biosynthesis of amino acids
fpb01240
Biosynthesis of cofactors
fpb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NLJ00_15885
09102 Energy metabolism
00680 Methane metabolism
NLJ00_15885
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NLJ00_15885
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NLJ00_15885
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NLJ00_15885
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NLJ00_15885
Enzymes [BR:
fpb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NLJ00_15885
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UUF12738
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Position
3784346..3785620
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AA seq
424 aa
AA seq
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MQRDEQIFDLILEEKDRQIHGLELIASENFVSDQVMEAAGSVLTNKYAEGYPGKRYYGGC
EVVDVIEQIAIDRAKELFGAEYANVQPHSGSQANTAVYHACLNPGDTILGFDLSHGGHLT
HGSPVNFSGRLYRPVFYGVDAETGRLDYDKIQEIATKEQPKLIIAGASAYSRDMDFARFR
QIADSVGAILFADISHPAGLIAKGLLNDPIPHCHIVSTTTHKTLRGPRGGLILMGKDFEN
PQGLKTPKGEIRMMSSLLDLAVFPGNQGGPLMHIIAAKAVAFGEALKDEFFSYAMQLQKN
ANAMADAFVKRGYNIISGGTDNHMMLIDLRNKNISGKEAENALVKAEITVNKNMVPFDDK
SPFITSGIRVGTAAITTRGLVEKDMETIVALIDKVLTDHTNEDVIEEVAEQVNELMSERP
IFAY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgacgaacaaatttttgatcttattctagaagaaaaagatagacaaattcac
ggattagaactaattgcttcagaaaattttgtaagtgatcaggtaatggaagcagccggg
tctgttttaactaataaatatgctgaggggtatcctggcaaaagatactacggcggttgc
gaagtagttgacgttatcgagcaaattgctattgacagagctaaagaattatttggtgct
gaatacgcaaacgtacagcctcactcaggttctcaggcaaatacagcagtttatcacgca
tgtttaaatcctggtgatactattttaggtttcgatttatctcacggtggtcacttaacg
cacggttctcctgtaaacttttcaggacgtttataccgtccggttttttacggagtagat
gctgaaactggtcgtttagattatgataaaattcaggaaattgcaacaaaagaacagcca
aaattaatcatcgcaggagcttcggcttattctcgtgatatggattttgctcgtttcaga
caaatcgctgacagcgtaggagcaattttatttgctgatatttctcatcctgcaggtctt
attgcaaaaggattattaaacgatccaattccacattgtcatattgtttctacaacgact
cacaaaacattacgcggacctcgtggaggtttgatcttaatggggaaagatttcgaaaac
ccacaaggattaaaaactccaaaaggagaaatcagaatgatgtcttcattattagactta
gctgtttttccaggaaaccaaggtgggcctttaatgcatattatcgctgctaaagcagtt
gcttttggtgaagcattaaaagatgaattcttctcttatgcaatgcaattacaaaaaaat
gcaaacgcaatggcagatgctttcgtaaaaagaggttacaacattatctctggcggaact
gataaccacatgatgcttatcgatttaagaaataaaaacatttctggtaaagaagctgaa
aacgcattagtaaaagcagaaattacagtaaataaaaacatggttccatttgacgataaa
tcaccatttatcacttcaggaattcgtgttggaacagctgcaatcacaactcgtggttta
gttgaaaaagatatggaaactatcgtagctttaatcgataaagttcttactgatcataca
aatgaagatgttatcgaagaagttgctgaacaagtaaacgaattaatgagcgaaagacca
atttttgcgtattaa
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