Flavobacterium panici: NLJ00_17020
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Entry
NLJ00_17020 CDS
T08520
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
fpb
Flavobacterium panici
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fpb02000
]
NLJ00_17020
Transporters [BR:
fpb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NLJ00_17020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
FAM195
Motif
Other DBs
NCBI-ProteinID:
UUF12963
LinkDB
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Position
4044355..4045980
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AA seq
541 aa
AA seq
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MKNIFKHIKFIPLVFLLLVSCEDLDLAPEDRFTDSNYWTSVEKAQLMLNTAYSQMQKSQY
FFYNEALSDNAYNGRGDNAGAASIGAGLYDPSLGRIKEEWNDRYGGIKSCNLLLENIDRV
PNADPGVITRMKAEARFIRAFQHFQLTTWFGDIPLLQKDPSLTEATTISRTSHAEVIQFV
LDELNAVIPALPKNTQLATADRGKITMGAAVALKARVLLYEGKWQEVVQTLEPFLTNTYG
TYSLFPSYEGLFQQQNEYNSEDILSLQYVPIDRTWGEFFDMAPISAGSRLNALAPTQELV
DSYLMLNGKKINETGSGYNENNPYVNRDPRLTYTVVYDQYNWKEADGSSHIIYIKPGSSP
TNEHPDEFAQGSSSTPTGYFTRKYYDVQHGTDLKSGINLMLFRYADVLLMYAEAKNELSQ
MTSTVWDQTIKPIRSRAGFTDAAALNYNAALGQAGLKEVIRNERRTEFGMEGLRIFDIRR
WKIAENVLNGYAHGAKFGVSSVDNGYLRVNLRTFDPAKHYLWPIPRDERLINTNLSQNPN
W
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatatttaaacacataaaattcataccattagtattcttactactggtaagc
tgcgaagatcttgatcttgcaccagaagatcgatttacagattctaattactggacaagt
gtagaaaaagcgcaattgatgttgaatacagcttattcgcaaatgcaaaaaagccagtat
ttcttttataacgaagcactttctgataatgcctacaacggaagaggtgataatgcaggt
gcagcatctattggagcaggactttacgatccttctttaggaagaataaaagaagaatgg
aacgacagatacggcggaattaaatcctgtaatcttttattagaaaatattgacagagtt
ccaaatgcagatccgggtgtaattacaagaatgaaagcagaagcccgttttataagagca
tttcagcattttcagttaacaacctggtttggagatattcctcttttacaaaaagatccg
tctcttacagaagcaactacaatttcgagaacgtcacatgcagaagtaattcagtttgta
ttagatgaattgaatgctgtaattccggcattgccaaaaaacacacagcttgccacggca
gacagaggaaaaatcacaatgggagctgctgtagccttaaaagcaagagtacttttatac
gaaggaaaatggcaggaagtagtgcagacattagaaccatttttaacaaatacttacgga
acatacagtttgttcccttcttatgaaggtctttttcagcagcaaaatgagtacaatagc
gaagacattttgagcttacaatatgtaccaatagacagaacgtggggtgagttttttgat
atggcgccaatttctgcaggttcaagattaaatgcccttgctccaacacaggaattagta
gatagttatttaatgcttaacggaaaaaagatcaacgaaacaggttcaggatacaatgaa
aataatccttatgtaaacagagatccaagacttacttatacagtagtttacgatcaatac
aactggaaagaagccgatggaagttcacacattatttacatcaaaccgggatcttctcca
actaatgagcatccagatgaatttgcgcaaggttcatcatcaacaccaacgggttatttt
acacgtaaatattacgatgtacaacacggaactgatttaaaatcaggaatcaacctaatg
ttgtttagatatgcagatgttttattgatgtatgcagaagctaaaaatgagttaagccaa
atgacgagcacagtttgggatcagactattaaaccaattagatctcgtgcaggttttaca
gatgcagcagctttaaattataatgccgcattaggacaagccggacttaaagaagtaatt
agaaacgagcgtcgtacagaatttggaatggaaggcttaagaatctttgatatcagaaga
tggaaaattgccgaaaatgttttaaacggatatgcacacggagccaaatttggagtatcg
tctgtagacaatggttacttaagagtgaacttaagaacttttgatcccgcaaagcattat
ttatggccaataccaagagacgaacgtttgattaacaccaatttatctcaaaatccaaac
tggtaa
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