Flavobacterium panici: NLJ00_20575
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Entry
NLJ00_20575 CDS
T08520
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
fpb
Flavobacterium panici
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fpb02000
]
NLJ00_20575
Transporters [BR:
fpb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NLJ00_20575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
UUF13656
LinkDB
All DBs
Position
complement(4902480..4904249)
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AA seq
589 aa
AA seq
DB search
MKTKTSFSIKIITIFSFIFLLNSCTDLNEAVLDEKLGTDATDPAGSLAAAYDRLGDGTFT
DHGAVFAMQEYTTDEAILPTRGSDWGDGGKWRDMHEFTWTSSNAIIVGNWDLLTNGITRS
LTAIKSSEENTFPEKKLFLAEAKALLAYYTYTTLDLYGQAPYRDPLNVDAPIQILKADTQ
IDQLIKDVEAILPDLADIGTQRTYHGRFTKQAGYAFLATMYLNRATFKDRYNASSNFNFN
EPAVSGTGTDMDRVIYYTSLLIDSGKFSLESDFFKNFARDNDNGKELIFAISQKIDYIRN
GSNSFAYVCMERNQRTSALNRGTNAACTTPEFYASWDGNHDDPRFEQHYQYADGTWFMND
GTDVSVPATDIVPKSSPAQPWFHFNRGIQAGPQYGPVLLTSASFQMIGNRIKVSPLVMEK
STTTRMDFTPSLTFADPTKSVFAQNEINQGARVFKYEFDPEGGNGNSNVDIPLFRLGGMY
AMRAEALYRKGSTGPAMDDLNKLRTSRKRESLFANAPGKALTSLDGAQLYKELGFELYWE
LQRRPESIRFGKFDLAGTAKAATQPFRRYFPIPQTVIDQKLFKQNQGYN
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaagacatcttttagcataaaaattataacgatattctcttttatttttcta
ttaaacagctgtacagatcttaatgaagctgtattagatgaaaaattaggaacagatgct
acagaccctgcaggttcgcttgctgccgcttatgacagacttggagacggaacttttaca
gatcacggagctgtttttgcaatgcaggaatatactacagatgaggctattttaccaact
cgcggaagtgactggggagatggtggaaaatggagagatatgcatgaatttacatggact
tcaagtaatgctattattgtaggtaactgggatttattgacaaacggaattacacgttct
ttaacggcaattaaatcatctgaagaaaatacttttcctgaaaagaaattatttttagca
gaagcaaaagctcttttagcctattatacctatactacattagatctttacggacaagct
ccatatagagatccgttgaatgtagatgcaccgatacaaattttaaaagcagatactcaa
attgaccaattgatcaaagatgttgaagcgatattaccagatttggctgatattggaact
caaagaacttaccacggaagatttacaaaacaagctggttatgcttttttagcgacaatg
tatttaaatcgtgcgacatttaaagatcgttacaatgcttcatcaaactttaattttaat
gaaccagctgtatcaggtacaggaacagatatggaccgtgttatttattacacttcatta
ctaattgattcagggaaatttagtttagaaagcgactttttcaaaaactttgcaagagac
aacgataatggtaaagagcttatttttgcaatttctcaaaagatagattatatccgtaac
ggatctaacagttttgcttatgtatgtatggagcgtaaccagagaacatctgctttaaac
agaggaacaaatgcagcatgtacaactcctgaattttacgcaagctgggatggaaatcat
gacgatccaagatttgagcagcattatcaatatgctgatggtacatggtttatgaatgat
ggtacagatgtaagtgtgcctgcaacagatattgttcctaaaagcagcccagcacaacct
tggttccattttaacagaggtattcaggccggaccacaatatggtcctgtattattgact
tctgcatcttttcaaatgattggtaaccgtattaaagtttctccattagttatggaaaaa
agtactactacgagaatggattttacaccatcattaacgtttgcagatcctactaaatct
gtttttgctcaaaatgaaatcaatcagggtgctcgtgtatttaaatatgagtttgatccg
gaaggaggaaacggaaacagtaatgttgatattcctttattccgtttaggtggaatgtac
gctatgagagctgaagcactttacagaaaaggaagcacaggaccagcaatggatgatttg
aacaaattgcgtacaagcagaaaaagagaatcattatttgcaaatgctccgggaaaagcg
cttacttcattagatggggcgcaattatataaagaattaggtttcgaattatactgggaa
ttacaaagaagaccagagagcatccgttttggaaaatttgatttagctggaacagcaaaa
gctgctactcagccattcagaagatattttccaattccacaaacagttatcgatcaaaaa
ctgtttaaacaaaaccaaggatacaattaa
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