Flavobacterium panici: NLJ00_24980
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Entry
NLJ00_24980 CDS
T08520
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
fpb
Flavobacterium panici
Pathway
fpb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NLJ00_24980 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fpb01007
]
NLJ00_24980 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpb03016
]
NLJ00_24980 (hisS)
Enzymes [BR:
fpb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
NLJ00_24980 (hisS)
Amino acid related enzymes [BR:
fpb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NLJ00_24980 (hisS)
Transfer RNA biogenesis [BR:
fpb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NLJ00_24980 (hisS)
Prokaryotic type
NLJ00_24980 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2
tRNA-synt_2d
AOC_like
Motif
Other DBs
NCBI-ProteinID:
UUF14501
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All DBs
Position
complement(5964743..5966170)
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AA seq
475 aa
AA seq
DB search
MASKPSIPQGTRDFSPAEVSKRQYIIQTIKTNFEKFGFQPIETPSFENSDTLMGKYGEEG
DRLIFKILNSGNFFFNKNKIELPESIESLQVNSAETIDLSQRIELNKFTGRISEKALRYD
LTVPFARYVVQHQNEIEFPFKRYQIQPVWRADRPQRGRYREFYQCDADVVGSTSLWQEVE
LVQLYDTVFTSLGLEGVTIKINNRKILSGIAEVIGASDKLIDFTVALDKLDKIGEDGVKK
EMIEKGISETALVKVQPLFRFSGTFADKIKQLSELLASSEEGMKGVEELKFICDNVAVLG
LSSAILDLDVTLARGLNYYTGAIFEVAAPKTVSMGSIGGGGRYDDLTGIFGLKNMSGVGI
SFGLDRIYLVLEELQLFPETVAATSKAIFINYGDKEALYASKAIQKLRQENIKVELYPDN
VKVGKQFQYADKRLIPFAVIAGDQEIASNSYALKNLVTGEQISVDFEGLKNALLI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaaaccaagcattccacaagggacaagagatttttcgcctgccgaggtgtca
aaacgtcaatatattattcaaacgataaaaactaattttgaaaaatttggttttcagccg
atagaaactccctcgtttgaaaactcagatactttgatggggaaatatggagaagaagga
gatcgtttgatttttaaaatcctgaattcaggaaactttttcttcaataaaaataaaatt
gaattaccggaatctatagaatcactgcaagttaattctgccgaaactattgatttaagc
caaagaattgaactgaataaatttacaggaagaatttcagaaaaagcattgcgttacgac
ttaacagttccgtttgcaagatacgttgtacaacaccaaaacgaaattgaatttcctttt
aaaagataccagattcaaccagtttggagagctgacagaccacaaagaggacgctacaga
gaattctatcaatgtgatgccgatgttgtggggtcaacttcactttggcaggaagtagaa
ttggttcagttgtatgataccgtatttacttctttaggtttagaaggggtaacgattaaa
atcaataacagaaaaatattgtctggaatcgctgaagttattggtgcttcagataaattg
atcgattttacggttgctcttgataaattagataaaattggagaagacggcgtaaagaaa
gaaatgatcgaaaaaggtatttctgaaacagcgttggtaaaagtgcagccactttttaga
tttagcggaactttcgcagataaaatcaagcagctttcagaattattagcttcatcagaa
gaaggaatgaaaggagttgaagaattgaaatttatttgtgacaatgttgcagttttagga
ttgtcaagcgcaattttagatcttgatgtaactttggcacgtggattaaactattatacg
ggtgctatttttgaagttgcggctccaaaaacggtttcaatgggttctattggcggcggt
ggaagatacgacgatttgactggtatttttggtttgaaaaatatgagcggtgtcggaatc
tcttttggattagatcgaatttatttagttttagaagaattacaattgtttcctgaaact
gttgcagcgacttcaaaagcaatatttatcaattacggagataaagaagctttgtacgct
tcaaaagctattcagaaattaagacaggaaaatataaaagtagaattgtatccagataat
gtaaaagttgggaaacagtttcaatatgcagataaacgattgattccgtttgcagtaatt
gcaggcgatcaggaaattgcatcaaactcttacgcgcttaaaaatttagtgacaggcgag
cagatttcagttgatttcgaaggattgaaaaatgctttgttaatttaa
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