Flavobacterium psychrophilum CSF259-93: FPSM_00075
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Entry
FPSM_00075 CDS
T03254
Name
(GenBank) Seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
fpc
Flavobacterium psychrophilum CSF259-93
Pathway
fpc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fpc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FPSM_00075
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fpc01007
]
FPSM_00075
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpc03016
]
FPSM_00075
Enzymes [BR:
fpc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
FPSM_00075
Amino acid related enzymes [BR:
fpc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
FPSM_00075
Transfer RNA biogenesis [BR:
fpc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FPSM_00075
Prokaryotic type
FPSM_00075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
AIJ36570
LinkDB
All DBs
Position
complement(94190..95461)
Genome browser
AA seq
423 aa
AA seq
DB search
MLQIAFIRENQEKVIKALAKRSIDATSIVQEVVQIDEKRRATQVELDTILSESNSISKEI
GDLMKSGEKEKATALKEKIATNKEKTKELSEITETLAKDLLDKLYTLPNLPADIVPEGKT
PEENLNIFQEGDIPVLHEEAQPHWELIKKYDIVDFELGTKITAPGFPVYKGKGAKLQRAL
ISYFLDKNTDAGYQEYQVPHMVNEASAYGTGQLPDKEGQMYHDAKDNLYLIPTAEVPVTN
IFRDVILNENELPVLCTGYTPCFRREAGSWGAHVRGLNRLHQFDKVEIVRIEHPDKSYEA
LEGMVEHVKSILQELKLPYRILRLCGGDMGFASALTYDFEVFSTAQDRWLEISSVSNFET
FQSNRLKLRFKDKEGKNQLAHTLNGSSLALPRVLAGILENYQTPEGIVIPEVLRKYTGFD
IIN
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaatcgcatttattagagaaaatcaggaaaaagtaatcaaagctttggcaaaa
agaagcatcgatgctaccagtattgttcaagaagtggtacaaatagacgaaaaacgtcgt
gccacacaagtagaattagatactattttatccgaatctaatagcatatcaaaagaaatt
ggcgatttgatgaaaagcggcgaaaaagaaaaagcgaccgctctaaaagaaaaaattgct
acaaacaaagaaaaaaccaaagaactctctgaaattacagaaactttagcaaaagattta
ttagacaaactatataccttacctaatcttcccgcagatattgtccctgaaggaaaaaca
cccgaagaaaacctaaacattttccaggaaggtgacattcctgttttgcacgaagaagca
caaccacattgggaattgataaaaaaatacgacattgtcgatttcgaattaggaacaaaa
attacagcaccaggatttcctgtttataaaggaaaaggagcaaaattacaacgtgcgctt
atttcttattttttagataaaaataccgatgcggggtaccaagaataccaagtaccacac
atggtaaacgaagcatcggcctacggaactgggcaattgccagacaaagaaggacaaatg
taccacgatgcaaaagacaacttatatcttattccaactgccgaagttcctgtaaccaac
atttttagagatgttattcttaacgaaaacgaattacccgttttatgcacaggttatacg
ccttgttttcgtcgtgaagcaggatcatggggtgctcacgtgcgtggactaaaccgtttg
caccaatttgataaagtagaaatcgtacgaatcgaacatcctgacaaatcgtatgaagca
ctagaaggaatggtagaacacgtgaaaagcattttgcaagaactaaaattaccatacaga
atacttcgtctttgtggcggagacatgggttttgcatcggcattaacttatgattttgag
gtttttagcacagcacaagatcgttggttagaaatttcgtctgtatctaatttcgaaact
ttccaatctaatagattaaaattacgtttcaaagataaagaaggtaaaaaccaattggca
cataccttaaacggaagttctcttgctttaccaagagtattggcaggaattttagaaaat
tatcaaacaccagaaggaatagtaattcctgaagtacttagaaaatatacaggttttgat
atcatcaactaa
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