Flavobacterium psychrophilum CSF259-93: FPSM_01143
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Entry
FPSM_01143 CDS
T03254
Name
(GenBank) A/G-specific adenine DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
fpc
Flavobacterium psychrophilum CSF259-93
Pathway
fpc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FPSM_01143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpc03400
]
FPSM_01143
Enzymes [BR:
fpc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
FPSM_01143
DNA repair and recombination proteins [BR:
fpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FPSM_01143
Prokaryotic type
FPSM_01143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
Motif
Other DBs
NCBI-ProteinID:
AIJ37638
UniProt:
A0A076NVI1
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All DBs
Position
1269369..1270400
Genome browser
AA seq
343 aa
AA seq
DB search
MNFTEKIIAWYLENKRDLPWRKTSNPYAIWLSEIMLQQTRVAQGLPYYKAFTEKFPTVFD
LANATEEQVLKLWQGLGYYSRARNLHATAKFIANDLNGIFPSDYKNLLKLKGVGEYTAAA
IASFSYNEVVPVVDGNVFRVLSRYYNVATDIASGKAKKEFTLLAQELISKDNPALFNQAI
MEFGALQCVPKNPNCYFCPLNTSCAALSLKIVGQLPVKIKRLKVKNRFLNYLYILDNNNE
TTINQRTVKGIWHNLYEFPLVETEDLEPENIVLQLIKDKFDDISEILLMETETIIHKLTH
QHLHVKFWKIRRNTILENGLDFENLNKFPFPIVLHNFIENNRF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaattttactgaaaaaataatcgcttggtatttagaaaataagcgagatttgccctgg
cgaaaaacctcaaatccgtatgcaatttggttgtcggaaattatgctgcaacaaacaaga
gttgcacaaggactgccttattataaggcttttacggaaaaattccctacggttttcgat
ttggctaatgccaccgaagagcaggttttaaaactttggcaagggttaggatattattct
cgggctcgaaatttgcatgctacggcaaaatttattgctaatgatttgaacggaattttt
ccttcagattataaaaatttactaaaattaaaaggggttggagaatatacagccgccgca
attgcctctttttcttataatgaagtggttcctgttgttgatggaaacgtatttagggtg
ctttctcgttattataatgtagcaacagatatcgcttcgggaaaagccaaaaaagaattt
acgcttttggctcaagaactaatatcgaaagataatccagccttgtttaatcaagctatt
atggagtttggcgctttgcaatgtgttcctaagaatcctaattgttatttttgcccttta
aatacaagttgtgctgcgctttcgctaaaaatagttggccaattgccagtaaaaattaag
cgattgaaagtaaaaaataggtttttgaactatctatatatattagacaataataatgaa
acaacaataaaccagcgaacagttaaaggaatttggcataatttatatgaatttccattg
gttgaaaccgaagatttagagccagaaaatattgttttacaattaattaaagataaattt
gatgatatttccgagatattattaatggaaaccgaaaccataatacacaaactaacacac
caacatttgcatgttaaattctggaaaattagaagaaataccatattagaaaacggtctg
gattttgaaaatttaaataaatttccttttcctattgtgcttcacaattttatcgagaat
aataggttttaa
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