Flavobacterium psychrophilum CSF259-93: FPSM_02051
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Entry
FPSM_02051 CDS
T03254
Name
(GenBank) Phospholipid-lipopolysaccharide ABC transporter
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
fpc
Flavobacterium psychrophilum CSF259-93
Pathway
fpc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fpc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FPSM_02051
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fpc02000
]
FPSM_02051
Enzymes [BR:
fpc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
FPSM_02051
Transporters [BR:
fpc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FPSM_02051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
Zeta_toxin
AAA_22
ABC_ATPase
AAA_29
nSTAND3
PPV_E1_C
MMR_HSR1
AAA_24
APS_kinase
AAA_18
AAA_25
FeoB_N
AAA_16
Ploopntkinase3
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIJ38546
LinkDB
All DBs
Position
2264830..2266647
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AA seq
605 aa
AA seq
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MDNNIKKIFPFVKPYKNHVVWNIFYNILYALFSTLSFIALMPMMQVLFETTKAVNKKPIW
TDIWDITKYGKELLYYNITLLDKKDALILVIILIIFTFFFKNIFNYLASYHMMHLQNNVL
KDLRIQLFEKIISLPIGFYSEQRKGDVMSRMLGDVGQFQNTFFVVLELIVREPLTILFTI
IAMFNISVKLTLFVFVFIPISGFIISRLGKNLKSKSNKAQAESGFFISILEETLGGMKVV
KSYNAENTFTKKFTDSIMRMIKLSTSIGNKNNLASPLSEFLGIVTIAILLWYGGKMVLVD
HTLEGAVFIVYMALAYNILTPAKAISKASYSVKAGMAAAERVLVILEHENPIKSKENAIE
KNTFEDKIEIKNINFRYEEENVLKNFTITVPKGKTIALVGQSGSGKSTIANLLTRFYDVN
EGNITIDGIDIKDMKLESLRGLMGLVTQDSILFNDTIKNNILLGKENATDEEVIEALKIA
NAYEFVMNLPNGIETNIGDAGNKLSGGQKQRLSIARAVLKNPPIMILDEATSALDTESEK
FVQIALENMMQNRTSIVIAHRLSTIQKADNIIVMKKGEIVEQGTHTELLALNGTYSNLVT
MQSFE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggataacaatataaaaaaaatatttccttttgtaaagccatacaaaaatcatgtcgtt
tggaatatcttctataatattctttacgctttatttagtacactttcatttattgcacta
atgccaatgatgcaggtgctttttgaaactacaaaagcagtaaacaaaaaaccaatctgg
actgatatttgggatattacaaaatacggcaaagaattattgtactataacattacgctt
ttagacaaaaaagacgctttaattttagttatcattctaattatttttacttttttcttt
aaaaatatttttaattatttggcctcctaccacatgatgcatttgcaaaacaatgtgttg
aaagatttgagaattcagctttttgaaaaaattatttctttaccaataggcttttattcc
gaacaacgaaaaggagatgtcatgtctagaatgttaggagatgtaggtcagtttcagaat
actttttttgtggtcttagaactcatagtaagagaacctctaactatattgtttaccatc
attgccatgtttaacattagtgtaaaattgacattgtttgtttttgtttttatcccaatt
tcaggatttatcatatccagattaggaaaaaacttaaaaagcaaatctaataaagcacag
gcagaatcaggtttttttatatctattcttgaagaaactttgggcggaatgaaagtcgta
aaaagctataatgccgaaaatacgtttaccaaaaaatttacagattcgataatgagaatg
ataaaattatctaccagtattggaaataaaaacaacttagcatcaccattaagcgaattt
ttaggaattgtaaccattgccattttattatggtatggaggtaaaatggttttggttgat
cacactttagaaggtgcggtttttatagtatatatggcattagcatacaacatattaact
cctgcaaaagcaatttcaaaagcttcttattcggtaaaagctggtatggctgcagccgaa
agagttttagttatcttagaacacgaaaatccaatcaaatcaaaagaaaatgctattgaa
aaaaatacttttgaagacaaaattgaaatcaaaaacattaattttcgttatgaggaagaa
aatgtattgaagaactttaccattacagttcctaaagggaaaactatcgctttggttgga
caatcgggttcaggaaaaagtaccattgctaatttattaactcgtttttacgatgtaaac
gaaggaaatataactattgatggtattgatataaaagacatgaaactcgaatcacttcgt
ggtttgatgggattagttacgcaagattctatcctttttaatgatactataaaaaataat
attcttttaggcaaagaaaatgcaactgacgaagaagttattgaagcactaaaaatagcc
aacgcttatgaattcgtcatgaatttgccaaacggaattgaaaccaatattggcgatgcc
ggaaacaaactctctggcggacaaaaacaacgtttgtctattgctcgtgcagttctcaaa
aatcctccaatcatgattttagacgaagctacgtcagcattagataccgaaagcgaaaaa
tttgttcaaattgcattagaaaacatgatgcaaaacagaacttcgattgtaattgcccat
agattatctactattcaaaaagcagataatattattgtcatgaaaaaaggagaaattgta
gaacaaggaacacatacagagcttttagcgctaaacggaacttattcgaacttggtaacc
atgcaaagtttcgaatag
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