Flavobacterium psychrophilum CSF259-93: FPSM_02325
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Entry
FPSM_02325 CDS
T03254
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
fpc
Flavobacterium psychrophilum CSF259-93
Brite
KEGG Orthology (KO) [BR:
fpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpc03400
]
FPSM_02325
DNA repair and recombination proteins [BR:
fpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
FPSM_02325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
AAA_10
ResIII
AAA
AAA_16
AAA_30
FtsK_SpoIIIE
Zot
SLFN-g3_helicase
P-loop_TraG
AAA_6
CbiA
AAA_7
AAA_19
Zeta_toxin
AAA_31
HHH_5
Hydrolase
nSTAND3
TraG-D_C
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIJ38820
LinkDB
All DBs
Position
2560870..2562375
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AA seq
501 aa
AA seq
DB search
MSTAENFKTQITEGYACKGDSIILGGAMLEGEALDLHVSIPLKTLNRHGLIAGATGTGKT
KTIQVLSEQLAQKGIPVLMMDIKGDFSGVAKAGEEKPFITERHTKINIPFSPKAFSVELL
SLSAQEGVRLRATVSEFGPVLFSRILDLNDTQAGVISVIFKYCDDKKMPLLDLKDIKKVM
NYITEEGKDEISEEYGKISTSTTGTILRKIIELEQQGATTFFGEKSFEIDDLMRIDQNGH
GYINIVRLTDIQDKPKLFSTFMLNLLAEIYHQMPEKGDLEQPELVIFIDEAHLLFNEASK
TLLDQIETIIKLIRSKGVGVYFITQNPMDIPKGVLAQLGLKIQHALRAFTANDRQAINQT
ADNYPTSEFYKTEELLTALGIGEALVTALNEKGIPTPLAATMMRAPESRMDVLTENEISD
INSKSKLVAKYSEEIDRESAYEILTKKMEEISEEVSEKEDKKNASREPSTASVVGKSVLK
VVTSASFIRGAFSVLMKVLRK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggcagaaaatttcaaaacacaaataaccgaaggttacgcttgcaaaggcgac
agtattattcttggcggcgctatgctagagggcgaagcgttagatcttcacgtttcaatc
ccactaaaaaccttaaaccgtcacggactaattgctggtgcaactggaactggaaaaaca
aaaacgattcaggttttatctgaacaactggctcaaaaaggaattccagtacttatgatg
gatataaaaggtgatttttcgggtgtggcaaaagcaggcgaagaaaaaccatttataacc
gaaagacatactaaaataaacattcccttctcgccaaaagctttttcagtcgaattatta
tcgctttcggcacaagaaggcgttcgcttgcgcgctacagtgtcggaatttggccctgta
ttattttctagaattttagatttaaatgatacgcaggctggtgtaatatctgttattttt
aaatattgtgatgacaaaaaaatgcctcttttagacttgaaagacattaaaaaagttatg
aattatattaccgaagaaggaaaagatgaaatatcagaagagtatggtaaaatttcgact
tcgacaacgggaactattttaagaaaaataatcgaattagaacaacaaggcgcaacaaca
ttctttggcgaaaaatctttcgaaatagatgatttgatgcgtattgaccaaaatggtcac
gggtatataaatattgttcgtctaaccgatattcaagacaaacctaaattattttcgaca
tttatgttgaatcttttggcagaaatataccatcaaatgccagaaaaaggagatctagag
caacctgaattggtcatttttattgatgaagcgcaccttttatttaatgaggctagtaaa
acattattagaccagatagaaaccatcatcaaactgattcgatctaaaggtgttggcgtt
tattttattacgcaaaacccaatggatattcccaaaggcgttttagcacaattgggctta
aaaattcagcatgctttaagggcttttactgccaatgacaggcaggcgataaaccaaacc
gccgataattatccgacttcggagttttacaaaaccgaagaattactaaccgctcttgga
attggagaggctctagtaaccgctttaaatgaaaaaggaattcctacgccgctggccgct
acgatgatgcgcgcccctgaaagcagaatggatgttttgacagaaaatgaaatttcagac
ataaattcgaaatcgaaattagtagcaaaatattcggaagaaatagatcgtgaaagtgct
tacgagattctgactaaaaaaatggaagaaatatctgaagaagtttccgaaaaagaggac
aaaaaaaatgctagtagagaacctagtactgcaagtgtggttggaaaatctgtattgaaa
gtagttaccagtgctagctttataagaggcgcttttagtgttttgatgaaagttttgagg
aaataa
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