Flavobacterium psychrophilum CSF259-93: FPSM_02485
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Entry
FPSM_02485 CDS
T03254
Name
(GenBank) TRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fpc
Flavobacterium psychrophilum CSF259-93
Brite
KEGG Orthology (KO) [BR:
fpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpc03016
]
FPSM_02485
Enzymes [BR:
fpc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FPSM_02485
Transfer RNA biogenesis [BR:
fpc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FPSM_02485
Prokaryotic type
FPSM_02485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AIJ38980
LinkDB
All DBs
Position
complement(2737294..2737998)
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AA seq
234 aa
AA seq
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MTPEDYLNGQVLLIDKPLKWSSFQAVNKLKYSLINKLGLPKKFKIGHAGTLDPLATGLLI
VCTGKLTKSISEIQGQAKEYTGTFYIGATTPSYDLETQIDATFPIAHITEALIHETVKQF
LGEIDQKPPVFSAIKKDGVRLYEHARAGVEVEIASRKTQIYELEITRIALPEIDFRVVCS
KGTYIRSLAYDFGLALQSGAHLTVLRRTKIGNYDVKKAIDVTLFDELIVAKNEL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgactccagaagattatctaaacggtcaagttttactcatagacaaaccattaaaatgg
agttcttttcaagcagtaaataaattaaaatattcgcttataaataaattaggattacca
aagaagttcaaaattggccatgcaggaacactcgatccattagccacaggtttgttaatt
gtttgtacaggaaagcttacaaaaagcatttccgaaatacaaggtcaggccaaagaatat
acaggtactttctacattggcgccactacaccatcgtatgatttagaaacccaaatagac
gccactttcccaatagcacatattaccgaagccttaattcacgaaacagtgaaacaattt
ttaggcgaaatagatcaaaaaccacccgttttttcggctataaaaaaagacggcgtgcga
ttatacgaacacgctcgtgctggtgttgaagtagaaatcgcttctagaaaaacacaaatt
tacgaattggaaattactcgaatcgctttgccagaaatcgattttagagtcgtttgtagt
aaaggaacttatattcgttcgttagcttatgattttggattggctttgcaatctggcgca
catcttactgttttgcgaagaacaaaaattggcaattatgatgtaaaaaaggctattgat
gttactttgtttgatgaattgattgttgcaaaaaatgaattataa
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