Flavobacterium psychrophilum CSF259-93: FPSM_02621
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Entry
FPSM_02621 CDS
T03254
Name
(GenBank) Transcription accessory protein (S1 RNA binding domain)
KO
K06959
protein Tex
Organism
fpc
Flavobacterium psychrophilum CSF259-93
Brite
KEGG Orthology (KO) [BR:
fpc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
FPSM_02621
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
HHH_9
Tex_N
S1
YqgF
HHH_7
T2SSK
HHH_6
DUF7690
NXF_NTF2
HHH
ATP-synt_ab_C
HHH_2
Spt6_S1
OB_PDCD11
CTXphi_pIII-N1
DUF7458
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AIJ39116
LinkDB
All DBs
Position
complement(2884610..2886766)
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AA seq
718 aa
AA seq
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MTNIQFIAKQVATTPKNIESTVKLLNEDCTIPFISRYRKDTTGNLDEVFIEQIAKLNKEY
DLIVKRKEGILKSIEEQKALTPELKQKIDNSFDLQEIEDFYLPYKKKKKTKADVARENGL
EPLAKIIMNQKNDAVDFLATQYLNSNVINEEAALQGARDIIAEWVNENIYVRKQLRRLYE
RKATITTKVVKKKEEEEAAQKFNQYFEWSENLTKAASHRLLAMLRAEKEGFVKIKIEVDL
DEAYDLIDEIIIKNTNSAAISHVQLAIEDSYKRLLTPAISNEALQEAKAKADANSIQVFA
NNLGQLLLAPPLGEKRILAIDPGFRSGCKIVCLDEKGDLLYNETIYPHAPQNETAMAMKK
IKSMVNAYNIDAISIGNGTASRETEFFIKKIAFETRAVGEQGEAKPVQVFIVSEAGASVY
SASKIARDEFPNYDVTVRGSVSIGRRLSDPLAELVKIDPKAIGVGQYQHDVDQTKLKEEL
DNTVIRCVNSVGININTASKHLLSYVSGIGEKLAENIVQYRSENGPFENRKQLKKVPRLG
EKAYQQGVAFIRIHNAKNPLDNSAVHPEAYAIVEKMAKDLKLSVHDLIANKEKTALIKPE
HYITPEIGLLTLKDIIKELEKPGLDPRKSAKAFEFDPNVKTIKDLRTGMILPGIVNNITN
FGCFVDIGTKESGLVHISQLKAGFVSDVNEVVKLHQHVTVKVTEVDEDRKRIQLTMIL
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacatacaatttatagcaaaacaagtagctaccacaccaaaaaatatagaatct
actgtaaaattattaaatgaagattgtacaattccttttatttctcgttaccgaaaagac
accacaggaaatctcgatgaggtttttatcgagcaaattgccaagttaaacaaagaatat
gatcttattgtaaaacgaaaagaaggtattttaaaatcgatagaagagcaaaaagcacta
acaccagaattgaaacaaaaaatcgataattctttcgatttacaagaaatagaagatttt
tatttgccttacaaaaagaaaaagaaaaccaaggccgatgtagctcgtgaaaacggatta
gaaccactagctaaaatcatcatgaatcagaaaaatgatgctgtcgatttcttagcaacc
caatatttgaacagtaatgtgattaatgaagaggctgctttgcaaggcgcacgagatatt
atcgccgaatgggttaacgaaaacatctatgttcgcaagcaacttagaagactttatgag
cgcaaagcaaccattacgactaaagttgttaaaaagaaagaagaagaagaagcggcacaa
aaatttaaccaatatttcgaatggagtgagaatttaaccaaagccgcttcacacagatta
ttagccatgcttcgggcagaaaaggaaggatttgttaaaataaaaatagaagtagatctc
gatgaagcttatgatttaattgatgaaattatcatcaaaaacactaacagtgctgccatt
tctcatgtacaattggccattgaagacagttacaaaagattactcactcctgccatttcg
aacgaagctttacaagaggccaaagccaaagccgatgccaattctattcaggtttttgcc
aataatttagggcaacttttattagcaccaccattaggagaaaaacgaattctagccatc
gatcccggatttcgttcgggttgtaagattgtttgtctggacgaaaaaggcgatttatta
tacaacgaaaccatttatccgcacgccccacaaaacgaaactgcgatggcgatgaaaaag
ataaaatcgatggtcaatgcttataatatagatgctatttctataggaaacggaacagcg
agtcgagaaaccgaatttttcatcaaaaaaattgctttcgaaactcgagccgtaggcgaa
caaggcgaagccaaacccgttcaagtatttatcgtatctgaggcaggtgcctcggtatat
tcggcatcaaaaattgcgagagacgaatttcctaattacgacgttaccgttcgtggttcg
gtttccatcggaagaagattatcggatccgttggcagaattagtaaaaatagatcccaaa
gctattggcgtagggcaataccaacacgatgtagaccaaacaaaattaaaagaagagcta
gataatacggtcattcgatgcgtaaattcggtaggaataaacattaataccgccagcaaa
catttgctgagttatgtatctggaataggggagaaattagccgaaaatattgtgcaatac
cgctcagaaaacggaccatttgaaaacagaaaacaattaaagaaagtacctcgtttgggg
gaaaaagcttaccaacaaggtgtggcttttattagaattcacaatgccaaaaacccgtta
gacaattcggcagtgcatcctgaagcctacgcaattgtagaaaaaatggcaaaagatttg
aagttatctgtacatgatttaattgccaacaaagaaaaaacggctttaataaaaccggag
cattatatcacgcccgaaataggtttattaaccctaaaagacattataaaagaactcgaa
aaaccaggtttagacccgagaaaatcggccaaagctttcgaatttgaccctaatgtaaaa
accataaaagaccttcgaactggcatgattttaccaggaattgtaaacaatattaccaat
tttggttgttttgtcgatattggtactaaagaaagtggcttggttcacatttcgcaactt
aaagcaggttttgtgagtgatgtaaatgaagtagtcaagttgcaccaacacgttaccgta
aaagtcactgaggttgatgaagatagaaaacgaattcaattgacgatgattttataa
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