Fusobacterium pseudoperiodonticum: CTM68_00630
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Entry
CTM68_00630 CDS
T05232
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
fpd
Fusobacterium pseudoperiodonticum
Pathway
fpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CTM68_00630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpd03400
]
CTM68_00630
Enzymes [BR:
fpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTM68_00630
DNA repair and recombination proteins [BR:
fpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CTM68_00630
RecFOR pathway proteins
CTM68_00630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_14
nSTAND3
Bac_DnaA
Sigma54_activat
NTPase_1
AAA_16
RNA_helicase
AAA_2
Sigma54_activ_2
DUF815
AAA_18
MCM
bpMoxR
AAA_3
AAA_22
NB-ARC
TsaE
ABC_tran
NPHP3_N
AAA_19
AAA_33
AAA_25
AAA_24
Parvo_NS1
IstB_IS21
NACHT
AAA_17
Rad17
AAA_11
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ATV56352
LinkDB
All DBs
Position
complement(117403..118419)
Genome browser
AA seq
338 aa
AA seq
DB search
MDRIISELEMPNEIEIQKSLRPKSFDEYIGQENLKEKMNISIKAAQKRNMTVDHILLYGP
PGLGKTTLAGVIANEMQANLKITSGPILEKAGDLAAILTSLEENDILFIDEIHRLNNTVE
EILYPAMEDGELDIIIGKGPSAKSIRIELPPFTLIGATTRAGLLSAPLRDRFGVSHKMEY
YNIDEIKAIIIRGAKILGVKISEEGAIEISKRSRGTPRIANRLLKRVRDYCEIKGNGTID
VVSAKNALDMLGVDSSGLDELDRNIINSIIENYDGGPVGIETLSLLLGEDRRTLEEVYEP
YLVKIGFLKRTNRGRVVTPKAYQHFKKDEVKDEDKHEG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtggatagaattataagtgaacttgaaatgcctaatgagattgaaattcaaaaatcattg
agacccaaaagttttgatgaatatataggacaagaaaacttaaaagaaaaaatgaatatt
tcaataaaggccgctcaaaaaagaaatatgacagttgaccatattttactttatggccct
ccaggtttaggtaaaacaactttagctggagttattgccaatgaaatgcaggcaaattta
aaaataacatcaggacctattttagaaaaagcaggagatttagcagcaattttgacatct
ttagaagaaaatgatatcttatttatagatgaaattcatagattaaataacactgtagaa
gaaattttatatcctgctatggaagatggagaacttgatataattataggaaaaggtcca
tctgcaaagtcaataagaatagaattaccacctttcacattgattggtgcaacaacaaga
gcaggtcttttgagtgctccacttagagacagatttggtgttagtcataagatggaatat
tataatatagatgagataaaggctattattataagaggagcaaaaattttaggagtgaaa
attagcgaagaaggtgccatagaaatttcaaagagaagtagaggaacaccaagaatagct
aatagacttttaaaaagagttagagattattgtgaaattaaaggaaatggaacaatagat
gtggtaagtgctaaaaatgctttagatatgctaggtgttgatagcagtggcttagatgaa
ttagacagaaacattattaactccataattgaaaattatgatggaggaccagttggtata
gagactttatctcttttattaggagaagacagaagaaccttagaagaagtttatgaacct
tatttagtaaaaattggatttttaaaaagaactaatagaggtagagtagtaactcctaag
gcctaccaacattttaagaaagatgaggtaaaagatgaagataaacacgaaggttag
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