Fusobacterium pseudoperiodonticum: CTM68_01950
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Entry
CTM68_01950 CDS
T05232
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fpd
Fusobacterium pseudoperiodonticum
Pathway
fpd03420
Nucleotide excision repair
fpd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CTM68_01950
03430 Mismatch repair
CTM68_01950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpd03400
]
CTM68_01950
Enzymes [BR:
fpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTM68_01950
DNA repair and recombination proteins [BR:
fpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTM68_01950
MMR (mismatch excision repair)
Other MMR factors
CTM68_01950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
DEAD
PcrA_UvrD_tudor
CarD_TRCF_RID
COG4_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
ATV58176
LinkDB
All DBs
Position
376408..378615
Genome browser
AA seq
735 aa
AA seq
DB search
MNLLEKLNEKQREAASQIDGSILILAGAGSGKTRTITYRIAHMIENIGISPYSILAVTFT
NKAAKEMRERVEDLVGEVAKSCTISTFHSFGMRLLRMYAAEVGYSPNFTIYDTDDQKRII
KAILKGQNITMNGNKLTERDLISIISKIKEEIKTLEEYSVMNKQIIEVYEKYNRSLIESN
AMDFSDILLNTYKLLQNSSILEKIQNKYKYIMIDEYQDTNNLQYKIIDLIARKSSNLCVV
GDENQSIYGFRGANILNILNFENNYKNAKIIKLEENYRSTSTILDAANELIKNNKSSKDK
RLWTQNGKGDLIKVLVCDNARDEVSKIIDIIKENHQNGVPYKDMTILYRTNMQSRVFEEG
LLRYNIPHKVFGGISFYSRAEIKDIIAYLSIIVNPQDELNLQRIVNVPKRKVGEKGIEKI
IAFARENNLNLLDALSHVKDISGLTAIGKEKLSEMYDIIKELKDLSYSETASYIVETLLD
KIKYIDYVKETYDDADARIENIEEFKNSILELENVVGVLRLSEYLENVSLVSATDDLEDE
KDYIKLMTIHNSKGLEFPIVFLVGFENEIFPGTRASFDEKEMEEERRLCYVALTRAEKKL
YLSHTAIRFVYGQDRLATPSVFLKEIPENLLDVEVKKERLYFEDDEFSDTRHSEKFKRFE
KKKTEINTKNTIVIPDDVKEVLDTLGFKIGDKVKHKKFGLGVIKKMDAKKIYVQYVDEIR
EMAIILADKLLTKLD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
ttgaacttattagaaaaattaaatgagaaacaaagggaagcagcctcacaaattgatggt
tcgattttaattttagcgggtgctggttctggtaaaacaagaacaattacatatagaata
gcacatatgatagaaaacattggaattagtccttatagtattttggcagtaacttttaca
aataaagctgctaaagaaatgagagaaagagttgaagaccttgtaggagaggttgcaaaa
tcttgtacaatttctaccttccactcctttggaatgagacttttaagaatgtatgcagct
gaagtaggttatagcccaaactttactatatatgacacagatgaccagaaaagaataata
aaagctatattaaaaggtcaaaacataactatgaatggaaataaattgactgaaagagac
cttatttctataatttcgaaaataaaagaagaaataaaaactcttgaagagtattcagtt
atgaataaacaaattatagaagtttatgaaaagtacaatagaagtttaatagaaagcaat
gctatggatttttcagatatacttttaaatacatataaattattacaaaactcttctata
cttgaaaaaatacaaaataaatataagtatataatgatagatgagtaccaagatacaaac
aatctacaatataaaataatagatttaatagcaagaaaatcatctaatttatgtgttgtt
ggagatgaaaaccaaagtatatatggatttagaggagctaatatattaaatatccttaat
tttgaaaacaactataagaacgctaaaataataaaactagaagaaaattatagatcaact
agcactatactagatgctgctaatgaacttattaaaaataataaatcttctaaagataaa
agactatggacacaaaatggaaaaggagacttaatcaaagtcttagtttgtgataatgca
agagatgaagtaagtaaaataattgatataataaaagaaaatcatcaaaacggtgttcca
tataaggatatgacaattttgtatagaactaatatgcaatcaagagtatttgaagaagga
cttttaagatataatatacctcataaagtctttggtggaattagtttctactctagagca
gaaattaaagatataattgcatatctatctattattgttaatccacaagacgaattaaat
ttacaaagaatagttaatgtccctaaaagaaaagttggggaaaaaggaatagaaaaaata
attgcctttgcaagagaaaataatcttaatttacttgatgcactttctcatgtaaaggac
atttcaggattaacagcaataggaaaagaaaaactttctgaaatgtatgatataataaaa
gaactgaaagatttatcttacagtgaaactgcctcatacatagttgaaactttactagat
aagataaaatatatagactatgtcaaagaaacttatgatgatgcagatgcaagaattgag
aatattgaagagtttaaaaactctattttagaattagaaaatgttgttggtgtattaaga
cttagtgaatatttggaaaatgtttcacttgtcagtgcaacagatgacttagaggatgaa
aaagattatataaaattgatgactatacacaactcaaaaggtctagaatttcctatagtt
ttcttagttggttttgaaaatgaaatcttcccaggtacaagggcatcgtttgatgagaaa
gaaatggaagaagaaagaagactttgctatgttgccttaacaagagcagaaaagaaacta
tatttatctcatacagcaataagatttgtctatggtcaagatagattagcaactccttct
gtatttttaaaagaaatacctgaaaaccttttagatgtagaagttaaaaaagaaagatta
tactttgaagacgatgaattttcagatacaagacattctgaaaagtttaagagatttgaa
aagaagaaaactgaaataaatacaaaaaatactattgtaattcctgatgatgtaaaagaa
gtactagatacattaggttttaaaataggtgataaagtaaaacataaaaaatttggttta
ggtgtcatcaaaaagatggatgctaaaaaaatatatgttcaatatgttgatgaaataaga
gaaatggctattatactagctgataaacttttaactaaattggactag
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