Fusobacterium pseudoperiodonticum: CTM68_05445
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Entry
CTM68_05445 CDS
T05232
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fpd
Fusobacterium pseudoperiodonticum
Brite
KEGG Orthology (KO) [BR:
fpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpd03032
]
CTM68_05445 (gyrB)
03400 DNA repair and recombination proteins [BR:
fpd03400
]
CTM68_05445 (gyrB)
Enzymes [BR:
fpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CTM68_05445 (gyrB)
DNA replication proteins [BR:
fpd03032
]
Prokaryotic type
DNA Topoisomerases
CTM68_05445 (gyrB)
DNA repair and recombination proteins [BR:
fpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CTM68_05445 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
DUF7077
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ATV57168
LinkDB
All DBs
Position
1042675..1044594
Genome browser
AA seq
639 aa
AA seq
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MEENMSYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCNKI
EVKILPDNIIEVVDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKFENDNYKVSGGLHGVG
VSVVNALSEWLEVEVRKEGNVYYQKYHRGKPEEDVKIIGSCEASEHGTTVRFKADGDIFE
TLVYNYFTLSNRLKELAYLNKGLTIVLSDLRKEEKKEEIYKFDGGILDFLNEIVKEEATI
IDKPFYVSSEQDNVGVDVTFTYTTSQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDV
GKAQGLLKDKDGKLMGNDIREGVVAIVSTKIPQPQFEGQTKGKLGNSEVSGIVNSIVSSS
LKIFLEDNPAITKIVVEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAE
ECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGT
SIGDTFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRYMRELINEGNIYIACPPLYKV
ASGKQIVYAYNDLELKNVLAQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKV
SVDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNIDI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaatatgagttatgaagcacagaatataacagttctggaaggtctagaagct
gttagaaaaaggccaggtatgtatataggtacaacatcagaaagaggtctacatcatttg
gtgtgggaaatagttgataactctgtagatgaggctttagctggttattgtaataaaata
gaagtgaaaattcttccagacaacataatagaagttgttgataacggtagaggaattcca
acagatatccacccaaaatatggaaaatcagcattagaaatagtcttaacagttctacat
gcgggtggaaaatttgaaaatgataactataaggtttcaggaggtctacacggggttgga
gtttctgtagttaatgcactttctgaatggctagaagttgaagttagaaaagaaggaaat
gtatattatcaaaaataccacagaggaaaacctgaagaagatgttaagataataggttct
tgtgaagctagtgaacatggtacaacagtaagatttaaagctgatggagatatctttgaa
acgttggtatataactatttcactctttcaaatagattaaaagaattagcttacttaaat
aaaggattaactatagttctttcagatttaagaaaagaagaaaagaaagaagaaatttat
aaatttgatggaggaattttagatttcttaaatgaaattgtaaaggaagaagcaactatt
atagacaagcctttctatgtatcatcagaacaagataatgtgggagtagatgtaacattt
acttatactacttcacaaaatgaagttatctattcttttgttaataatattaacactcat
gaaggtggaacacatgttcaagggtttagaactgctttaacaaaagttataaatgatgta
ggtaaggctcaaggtttactaaaagataaagatggtaaacttatgggaaatgatataaga
gaaggggttgtagcaatagtatcaacaaaaatacctcaaccacaatttgaaggacaaact
aaaggaaaattaggaaactctgaagtttcaggaatagttaattctattgtttcaagtagt
ttaaaaatattcttagaagataatcctgctataacaaaaatagtagttgaaaagatatta
aactctaagaaagctagggaagcagctcaaaaagcaagagagttagttttaagaaaatca
gttttagaagttggatctcttccaggaaaattagcagattgtacttctaaaaaagctgaa
gaatgtgaaatctttatagtcgaaggagattcagctggaggttctgcaaaacaaggtaga
gatagatataatcaagctattttaccacttagaggaaagataataaacgttgagaaagca
ggattacataaatctttagaaagttcagaaataagagctatggtaactgcttttggaaca
agtataggagatacatttgatatatcaaaattaagatatggaaaaataattcttatgacc
gatgccgatgtcgatggggctcatataagaacattgattttaactttcttgtatagatat
atgagagagttaataaatgaaggaaatatatatattgcttgtcctccactatataaagta
gcatcaggtaaacaaattgtatatgcttacaatgatttagaattaaaaaatgtcttggca
caaatgaatcaagacaataaaaaatatactatacaaagatataaagggctaggagaaatg
aaccctgagcaactttgggaaacaacaatgaaccctgatggaagattacttctaaaagtt
tcagtagataatgctagagaagctgatatgctatttgataaacttatgggagataaagtt
gaaccaagaagagaatttatagaagaacatgcagaatatgtaaaaaatatagatatataa
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