Fusobacterium pseudoperiodonticum: CTM68_08615
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Entry
CTM68_08615 CDS
T05232
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
fpd
Fusobacterium pseudoperiodonticum
Brite
KEGG Orthology (KO) [BR:
fpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpd03400
]
CTM68_08615
DNA repair and recombination proteins [BR:
fpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CTM68_08615
Archaeal homologous recombinant proteins
CTM68_08615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_27
AAA_29
AAA_21
SbcC_Walker_B
DUF211
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ATV57730
LinkDB
All DBs
Position
complement(1705291..1708056)
Genome browser
AA seq
921 aa
AA seq
DB search
MIIKRVKLENYRSHSNTTIDFSKGVNLILGKNGKGKTSILEAISSVMFNTKDRSGKETGK
NFIKFGEKSGKIEVEFTANDGRDYIFKTEFFKSKPKKQSLTDINGLDCEGDIQENLEELC
GIKKGFEETYENIVIAKQNEFINIFKAKPKDREEIFNKIFNTQIYKEMYDGFLKEATDKY
TKQIDYLSRDINSLKDNMEDKEEISNFLKEEEALKESLNTEFSKTTEISTKLSNEIKDYE
TDEINLKNLISNIEDEENKIKKYSNLLKDNIVEAKKAKKAKTIVEKNEKPYLEYLEIENK
LKDFREIHTNLLQEQKLNIQYQNNIEKLELSNKTLKTDIANLEENISKNSEKKDSLDKNI
AELKSKEEDLSSKLKEYESLLIKLEDLEKTKKKNSDKHLEKKTEINILEKDLSAKKDLFM
PINIEDIEKQLTVFKDLEKEIKSLEEDKIAFEIEIKTLKNASNELSSKICPYLKENCENL
KDKEADDYFSSKISIKTEAIEDLKKKIEEKTIILAEKAVFEEKKKQYFELDKTIKNLELS
LKTEEVNLKEIELNIKSLDISIQQLIENQEFQDSTSLKEHKKGLEVELKNLNLDEKRENL
KNLIESLEFEKEKILKNQSSIENNLKEIDEYYKKIKADTDKNIENIASEIKIFENKLTEL
KTSYNEYIKNNVLAKDLENLLLKVEKSIKELYSLRFNKNSLKEKVFSLEDKIKNIKIDEL
REKYDILKEELNEISKKLGSSQEKIENFKKTLEKIASQEEKQKKLLDDLKKLEDKSNRAN
LIRNEVGKMGRAISKYMLSGISNIASLNFNKITGRTERIEWSNDEKDKYVLYLVGQERKI
AFEQLSGGEQVSVAIAIRGTMTEYFTNSRFMILDEPTNNLDTERKKLLAEYMGEILKNLD
QSIIVTHDDTFREMAEKIIEL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgataattaaaagagttaaacttgaaaattatcgttctcattctaatacaactatcgat
ttttctaagggagttaatcttattttaggaaagaatgggaagggcaaaacttctatactt
gaagctatcagttcagttatgttcaatacgaaagatagatcaggtaaggaaacagggaaa
aactttataaaattcggtgaaaaatctggaaagattgaagtagaatttacagctaatgac
ggtagagactatatttttaaaactgaattttttaaatcaaaacccaaaaaacaatctttg
actgatataaatggtttggactgtgaaggggatattcaagaaaacttagaagagctatgt
ggaataaaaaagggctttgaagaaacttatgagaatatagtcattgctaagcaaaatgag
ttcataaatatctttaaagctaaacctaaagatagggaagaaatatttaacaagattttc
aatacccaaatctataaagagatgtatgacggttttttaaaggaagctactgataaatat
acaaaacaaatagattatttaagtagagatataaattctttaaaagacaatatggaagat
aaggaagaaatctctaactttcttaaagaagaagaagcattaaaagaaagtctaaataca
gaattctctaaaactactgaaataagtactaagctatcaaatgaaataaaagattatgaa
acagatgaaataaatctaaaaaatctgatttctaatattgaagatgaagaaaataaaata
aagaaatattcaaatcttttaaaagataatattgttgaagctaaaaaagctaaaaaggct
aaaactatagttgaaaaaaatgaaaaaccttatttagagtacttagaaatagaaaataaa
ttaaaagattttagagagattcatactaacttattgcaagagcaaaaattaaatatccaa
tatcaaaataatatagaaaaattagagctttctaataaaactttaaagactgatattgct
aatttagaagaaaacatctctaaaaattctgaaaaaaaagatagtttagataaaaatata
gctgagcttaaaagcaaagaagaagatttaagttctaaactaaaagaatatgaaagtctt
ttaataaaattagaagatttagaaaaaactaaaaagaaaaattcagataagcacttagaa
aagaaaactgaaatcaatattcttgaaaaagacttatctgcaaaaaaagacttatttatg
cctattaatattgaagatattgagaaacaattaactgtttttaaagacttagaaaaagaa
ataaaatctttagaggaagataaaattgcttttgaaattgaaataaagactttaaagaat
gctagtaatgagctttcttctaaaatttgtccctatctaaaagaaaattgtgaaaatcta
aaagataaagaagctgatgattatttctcttctaaaatttctataaaaacagaagctata
gaagacttgaaaaaaaagatagaagaaaaaacaattattctagctgaaaaagctgttttt
gaagaaaagaaaaaacagtactttgaacttgataaaaccataaagaatttagaactttct
ttaaaaactgaagaagtcaatctaaaggaaattgaactaaatattaaaagtttggatata
agtattcaacaacttattgaaaatcaagaatttcaagatagtacgagcttaaaagagcat
aaaaaaggattagaagttgaacttaaaaatttaaatttagatgagaaaagagaaaattta
aaaaatcttatcgaaagtttagagtttgaaaaagaaaagattttaaaaaatcaaagttca
atagaaaataatctgaaagaaattgatgaatattataaaaaaattaaagcagatacagat
aaaaatattgaaaatattgcttctgaaataaaaatttttgagaataaattaactgagtta
aaaacttcatataatgaatatataaaaaataatgtcttagcaaaagacctggaaaactta
cttctaaaagtagagaaaagtatcaaagaactttattctttaagatttaataaaaattca
ttgaaagaaaaagtatttagcttagaagataaaataaaaaatataaaaatagatgaactt
agagaaaaatatgatattctaaaagaagaattaaatgaaattagcaaaaaattaggttca
tctcaagaaaagattgaaaactttaagaaaacattagaaaagatagcttcacaagaagaa
aaacaaaaaaaattgcttgatgacttaaagaagttagaagataagtcaaatagagcaaat
ttaattagaaatgaagtagggaaaatgggtagagctatttctaaatacatgcttagtggt
atcagtaacattgctagcttgaatttcaataagattacaggtagaactgaaagaattgag
tggagcaatgatgaaaaagataagtatgttctatatttagtagggcaagaaagaaaaatt
gcctttgagcagttatcaggtggtgaacaagtttctgttgcgatagcaataagaggaaca
atgacagaatacttcactaactctaggtttatgatattggatgagcctacaaacaactta
gacactgaaagaaaaaaattacttgctgagtatatgggagaaattttaaaaaatttagac
caaagtataatagttactcatgatgatacatttagagaaatggcagaaaagataatagaa
ttgtag
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