Fusobacterium pseudoperiodonticum: CTM68_09220
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Entry
CTM68_09220 CDS
T05232
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fpd
Fusobacterium pseudoperiodonticum
Brite
KEGG Orthology (KO) [BR:
fpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpd03400
]
CTM68_09220
DNA repair and recombination proteins [BR:
fpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CTM68_09220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rubredoxin_2
Lon_C
ChlI
DnaB_C
GvpD_P-loop
AAA_24
nSTAND3
AAA_14
AAA_16
AAA
AAA_22
NTPase_1
ABC_tran
SLFN-g3_helicase
ATPase_2
AAA_19
FeoB_N
NB-ARC
AAA_29
RsgA_GTPase
NACHT
DUF4310
DUF5048
AAA_30
Zeta_toxin
AAA_18
CobU
MeaB
KdpD
NRDD
zf-C3HC4_2
Motif
Other DBs
NCBI-ProteinID:
ATV57836
UniProt:
A0A930C3Z9
LinkDB
All DBs
Position
complement(1843447..1844829)
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AA seq
460 aa
AA seq
DB search
MAKGSVYYCSECGYKSVKWAGKCPQCGAWSSFEEVEEMPRDVKKATSSVSVASRASDIKV
YEFKDVEYNKEDRYKTKYEEFDRLLGGGLLKGEVVLVTGNPGIGKSTLLLQVANSYKDYG
DVLYISGEESPAQIKNRGERLKISGDGIYIMAEMDILNIYEYVVSKKPKVVIVDSIQTLY
NSSMDSISGTPTQIRECTLKIVEIAKKYNISFFIVGHITKDGKVAGPKLLEHMVDAVFNF
EGDEGLYYRILRSEKNRFGSTNEIAVFSMEENGMKEIKNSSEYFLSEREEKNIGSMVVPI
LEGTKVFLLEVQSLITDSGVGIPKRVVQGYDRNRIQILTAIAEKKLYLPLGMKDLFVNVP
GGLAIEDPAADLAVLISILSVYKGVSISQKIAAIGELGLRGEIRKVFFLERRLKELEKLG
FTGVYVPESNRKEIEKKKYKLKIIYLKNLDELLERMNKND
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggaagtgtttattattgttctgagtgtgggtacaaaagtgtaaaatgggct
ggtaagtgtccacaatgtggtgcttggtccagttttgaagaagttgaagaaatgccaaga
gatgtaaaaaaggcaacatcttcagtttcagttgcaagtagagcttcagatataaaagtc
tatgaatttaaagatgttgaatacaacaaagaagatagatataaaaccaagtatgaagaa
tttgatagattacttggtggaggtctcttaaaaggtgaagttgtattggtaacaggtaat
ccaggaataggaaaatccaccttacttttacaagttgctaactcatataaagattatggt
gatgttctatatatctctggtgaagaatcaccagcacagataaaaaatagaggtgaaaga
ttaaaaatatctggagatggcatatatattatggctgaaatggatattttaaacatctat
gaatatgttgtaagcaaaaaaccaaaagttgttattgtggattctatacaaacattgtat
aattctagtatggattccatatcaggaactcctacacaaataagagaatgtactctaaaa
attgttgaaattgctaaaaaatataatatatcattctttattgttggacatataacaaaa
gatggtaaggttgcagggcctaaattacttgaacatatggttgatgccgtttttaacttt
gaaggtgatgaaggactttattatagaatcttgagaagtgaaaaaaatagatttggatca
accaatgaaattgctgtattcagtatggaagaaaatggaatgaaagaaataaaaaattcc
tctgaatacttcttaagtgaaagagaagaaaaaaatataggaagtatggttgttcctatt
ttagaaggaactaaggtctttcttttagaagtgcaatcacttataacagatagtggtgta
ggtattcctaaaagagttgtacaaggttatgatagaaatagaatacaaattttaacagca
atagctgagaaaaaactttatcttcctcttggcatgaaagatttatttgtcaatgttcca
ggaggtttggcaatagaagatccagcagcagatttagctgtcttaatttctattttgtca
gtgtataaaggggtttctataagccagaaaattgctgcaatcggagaattgggattaaga
ggagaaatcagaaaagtctttttcttagagagaagattaaaagagctcgaaaaattgggc
tttacaggagtatatgttcctgaatcaaatcgaaaagaaattgagaagaaaaagtataag
ctaaaaataatatacttaaagaatttagatgaattattggaaaggatgaataaaaatgac
taa
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