Fusobacterium pseudoperiodonticum: CTM68_09245
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Entry
CTM68_09245 CDS
T05232
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
fpd
Fusobacterium pseudoperiodonticum
Brite
KEGG Orthology (KO) [BR:
fpd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CTM68_09245 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpd03019
]
CTM68_09245 (rnc)
03009 Ribosome biogenesis [BR:
fpd03009
]
CTM68_09245 (rnc)
03036 Chromosome and associated proteins [BR:
fpd03036
]
CTM68_09245 (rnc)
Enzymes [BR:
fpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CTM68_09245 (rnc)
Messenger RNA biogenesis [BR:
fpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CTM68_09245 (rnc)
Ribosome biogenesis [BR:
fpd03009
]
Eukaryotic type
90S particles
RNase
CTM68_09245 (rnc)
Prokaryotic type
rRNA processing factors
CTM68_09245 (rnc)
Chromosome and associated proteins [BR:
fpd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CTM68_09245 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
HTH_6
DUF5069
Motif
Other DBs
NCBI-ProteinID:
ATV57841
LinkDB
All DBs
Position
complement(1848997..1849701)
Genome browser
AA seq
234 aa
AA seq
DB search
MKNLLDLEHKLNYYFNNRNLLKTALLHKSLGNEKKEYKNQNNERLELLGDAVLDLIVAEY
LYRNYKSASEGTIAKLKAMIVSEPILAKISRQIGLGKFLMLSKGEILSGGRNRESILADA
FEAVLGAVYMDSNLEDARSFALGHIEQYITHIEEDEDILDFKSILQEYVQKNFKTVPTYE
LISEKGPDHMKEFEIQVVVGKYKEKAVAKNKKKAEQLSAKALCVKLGVKYHEAL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctattagatttagaacataaactaaattattactttaataatagaaattta
ttaaaaactgctcttcttcataaatcactaggtaacgaaaaaaaagaatataaaaatcaa
aacaatgaaagactagaactgctaggtgatgcagttctagatctcattgttgctgaatat
ttatatagaaattataagagtgcttctgaaggtactatagctaaattaaaagctatgata
gttagtgaacctatacttgcaaaaatatctcgtcaaataggcttaggaaagtttttaatg
ctaagtaagggagaaattctatctggtggtagaaatagagaatctatacttgctgatgcg
tttgaagctgtattaggtgctgtatatatggactctaatttagaagatgctagaagcttt
gctctaggtcatatagaacaatatataactcatatagaagaagatgaagatattttagat
tttaaaagtatactacaagaatatgtacaaaagaatttcaaaactgttcctacatatgag
cttatctctgaaaaaggacctgaccatatgaaagaatttgaaattcaagttgtagtagga
aaatataaagaaaaggctgttgctaagaataagaaaaaagctgaacaattgtcagctaaa
gccttatgtgtaaagttgggagttaaataccatgaagcattataa
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