Fusobacterium pseudoperiodonticum: CTM68_09420
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Entry
CTM68_09420 CDS
T05232
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
fpd
Fusobacterium pseudoperiodonticum
Brite
KEGG Orthology (KO) [BR:
fpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpd03019
]
CTM68_09420
Messenger RNA biogenesis [BR:
fpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CTM68_09420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_22
AAA_18
ABC_tran
AAA_24
AAA_33
SLFN-g3_helicase
Zeta_toxin
AAA_23
AAA_30
AAA_28
T2SSE
AAA_14
cobW
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ATV57875
LinkDB
All DBs
Position
complement(1884200..1885072)
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AA seq
290 aa
AA seq
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MKTKHIIIVTGLSGAGKTTALNILEDMNYYTIDNLPLGLEKSLLDTEIEKLAVGIDIRTF
KNTKDFFKFINFIKESGVKMDIIFIEAHEAIILGRYTLSRRAHPLKENTLLKSILKEKEV
LFPIREIADLIIDTTEIKNVELEKRFKKFLSGKDELNIDINMNIHIQSFGYKYGIPTDSD
LMFDVRFIPNPYYIEKLRDMNGYDKEVKDYVLSQKESTEFYSKLLPLIEFLIPQYIKEGK
KHLTISIGCSGGQHRSVTFVNKLAEDLKDSKVLSHINIYASHREKELGHW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaactaaacatatcattattgtaactggcttaagtggtgcaggaaaaacaactgct
ttaaatattttagaagatatgaactattacactattgataaccttcctttaggacttgag
aaatctctattggatacggagattgaaaaattggcagttggtattgatattagaactttc
aaaaatacaaaagatttctttaaatttattaactttattaaagaatcaggtgtaaaaatg
gatattatattcattgaagcacatgaagcaattattcttggaagatatactttaagccgt
agagctcatcctttaaaagaaaacactctattaaaaagtattttgaaagaaaaagaagtt
ctttttccaataagagaaattgctgatttaataatagatacaactgaaattaaaaatgta
gaattagaaaaaagatttaaaaaattcctatctgggaaagatgaattaaatatagatata
aatatgaatatccatattcaatcatttggttataaatatggtattcctacagatagtgat
ttgatgtttgatgtaagatttattcctaatccttattatattgaaaaattaagagatatg
aatggttatgataaagaagttaaagactatgttttatcacaaaaagagagtacagagttc
tattctaaattactaccacttattgaatttttaattcctcaatatataaaagaaggaaaa
aaacacttaacaatttctataggttgtagtggtggacaacatagatctgtaacttttgtt
aataagttagctgaagatttaaaagatagtaaagtattaagtcacataaatatttatgct
agtcatagggagaaagaacttggacattggtaa
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