Fusobacterium pseudoperiodonticum: CTM68_09560
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Entry
CTM68_09560 CDS
T05232
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
fpd
Fusobacterium pseudoperiodonticum
Brite
KEGG Orthology (KO) [BR:
fpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpd03032
]
CTM68_09560
03036 Chromosome and associated proteins [BR:
fpd03036
]
CTM68_09560
03400 DNA repair and recombination proteins [BR:
fpd03400
]
CTM68_09560
DNA replication proteins [BR:
fpd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CTM68_09560
Chromosome and associated proteins [BR:
fpd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CTM68_09560
DNA repair and recombination proteins [BR:
fpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CTM68_09560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
CzcE
Motif
Other DBs
NCBI-ProteinID:
ATV57903
LinkDB
All DBs
Position
1912606..1912914
Genome browser
AA seq
102 aa
AA seq
DB search
MTKKEFVDAFAKKGELKIKDSERLVAAFLETVEDALLKGEGVRFIGFGSWEVKERAAREV
TNPQTKKKIKVEAKKVVKFKVGKPLADKVAEQKAAKKATKKK
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaagaatttgttgacgcatttgcaaaaaagggagaactaaaaataaaagat
tctgaaagattagtagcagctttcttagaaactgtagaagatgcgttactaaaaggtgaa
ggagttagatttataggatttggttcttgggaagttaaagaaagagctgcaagagaagta
actaaccctcaaactaagaaaaaaattaaagtagaagctaaaaaagttgttaaattcaaa
gttggaaaaccattagcagataaagttgctgaacaaaaagctgctaaaaaagctacaaag
aaaaaataa
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