Fusobacterium pseudoperiodonticum: CTM68_10065
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Entry
CTM68_10065 CDS
T05232
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fpd
Fusobacterium pseudoperiodonticum
Brite
KEGG Orthology (KO) [BR:
fpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpd03016
]
CTM68_10065 (truB)
Enzymes [BR:
fpd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CTM68_10065 (truB)
Transfer RNA biogenesis [BR:
fpd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CTM68_10065 (truB)
Prokaryotic type
CTM68_10065 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ATV57994
LinkDB
All DBs
Position
complement(2025317..2026180)
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AA seq
287 aa
AA seq
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MEGIILVNKPKGISSFDVIRKLKKILKTKKIGHTGTLDPLATGLMLICVGKATKLASDLE
AKNKVYLADFEIGYATDTYDIEGKRIAENLIDVSKDNLELSLKKFIGNIKQVPPMYSAIK
IDGNKLYHLARKGIEIERPERDVTIEYIKLLDFKDNKAKIETNVSKGCYIRSLIYDIGLD
LGTYATMTELQRINVGEYSLTNSYTLEQMEEMAQNNDFSFLNSVEDVFSYEKYNLETEKE
FTLFKNGNTVKIKDNLENKKYRVYYQDEFLGLANIENNNLLKGYKYY
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggaataatacttgtaaataaacccaaaggaataagctcctttgatgttataaga
aagcttaaaaagattttaaaaactaaaaaaataggtcatacaggaactcttgacccttta
gcgacaggacttatgcttatctgtgttggaaaggctactaagcttgcttctgatttagaa
gctaaaaataaagtttatctggctgattttgaaataggttatgcaactgatacctatgat
attgaaggaaaaagaattgctgaaaatcttatagatgtttcaaaagataatttagaatta
tctttaaaaaaatttatagggaatataaagcaagttcctccaatgtactctgctataaaa
attgatggaaacaaactctatcatttagcaagaaaaggtattgagatagagagacctgaa
agagatgtaactattgaatatattaaacttttagattttaaagataataaagctaaaatt
gaaacaaatgtttctaaggggtgctatataagaagcttaatctatgatataggtttagat
ttaggaacttatgccactatgacagaacttcaaagaataaatgttggagaatattcttta
actaattcgtatacactggaacagatggaagaaatggctcaaaataacgattttagtttt
ttaaattctgttgaagatgtattttcttatgagaaatataatttagaaactgagaaagaa
tttactttatttaaaaatggtaacactgtaaaaataaaggataatttagaaaataaaaaa
tatagagtatattatcaagatgaattcttaggtttggcaaatatagaaaataataattta
ttaaaaggatataaatattattaa
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