Fervidobacterium pennivorans: Ferpe_0425
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Entry
Ferpe_0425 CDS
T01808
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fpe
Fervidobacterium pennivorans
Brite
KEGG Orthology (KO) [BR:
fpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpe03400
]
Ferpe_0425
DNA repair and recombination proteins [BR:
fpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ferpe_0425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA
NACHT
Lon_C
DUF7125
NB-ARC
RecA_N
AAA_22
AAA_16
nSTAND3
SLFN-g3_helicase
ABC_tran
ATP-synt_ab
NPHP3_N
DEAD
NTPase_1
AAA_5
AAA_24
ATPase_2
RNA_helicase
AAA_14
nSTAND_NTPase5
Rad51
GvpD_P-loop
RsgA_GTPase
ResIII
CbiA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AFG34565
UniProt:
H9UAM2
LinkDB
All DBs
Position
445272..446675
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AA seq
467 aa
AA seq
DB search
MPKTKTIYVCDKCGYESPKWFGRCPVCGEWNSAKEFQLKDASTEAKNIRSQDAGMMESHP
RFFDLHTALERSEEERIKTNIPAVDQLLNGGLVRGQVVLLGGEPGVGKSTLALQICDATA
KSNEREDHVVYYISGEESVQQVASRAKRLGIKNPRILISSETQIEDILSNIDPQKARLIV
IDSIQTLSSVDIDSPVGGVVQIKAVVEKVRIFSKKYNIPSLLIAHVTKEGVIAGPKLVEH
VVDTVIYFEGERTTDYRILRVQKNRYGPSGEISVFQMTQEGLKSLSEDILLNYSNTPGNV
FTSVFEGSRPLNVQIQALVSRVKMASGRRISHGIDVRKVIIISAVLAKHLNLPLDFHDIY
INVSGGLNITDPGCELAIAGAILSSFLDSYIGNVLMVGEVGLDGSIRPTVNVTKRIENAK
KLQIERIIIPASVDYNSINSKSDLKVEHVKDVRDLFELVMSEKTDKI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaacaaaaactatctacgtatgtgataagtgcggttacgagtcaccgaaatgg
tttggacgttgcccagtttgcggtgaatggaacagcgcaaaggaatttcaactaaaggat
gcttcaacggaagcaaaaaacattaggtctcaagatgcggggatgatggaatctcatcct
cgcttttttgatttgcatacagcccttgaaagatctgaagaagagagaatcaaaacaaac
attccagcagttgaccagctgttgaatggcggattagtccgaggacaagtcgtattgctc
ggtggggaaccaggcgttggtaagagtactttggcacttcaaatatgcgatgctacggct
aaaagtaacgaaagggaagaccatgttgtttattatatatcgggtgaagagagcgttcag
caagtagcaagtcgcgccaagagattaggaattaaaaatccaagaattttaatttcttcc
gaaacacaaatagaagatatcctcagcaacatagacccacaaaaagcaagactaattgtt
attgactcgatacagacactcagcagcgttgatatagattcccctgtcggtggcgttgtc
cagataaaagctgttgtcgaaaaagttagaattttttcaaagaagtacaacattccttcc
ttgcttattgcacatgttactaaagaaggagttatagcaggaccaaagctcgttgaacac
gttgttgatactgtgatatatttcgaaggtgaaagaacaactgattacaggattctaagg
gttcaaaaaaatagatacggtcccagcggagaaatctctgtcttccaaatgactcaggaa
ggattaaaaagcttatctgaggatatattactgaattattcgaacaccccaggtaatgtt
tttaccagcgtttttgagggaagtagacctttgaacgttcagattcaggcacttgtctcc
cgagtaaagatggcttccggaaggagaatctcgcatggtatagatgttagaaaggtcata
ataatatccgctgtcttagcaaagcatctgaacttgcctctggattttcatgatatatat
ataaatgtctctgggggactaaatataacagaccccggttgtgaattagcaattgcaggt
gcgatattgtcgtcttttctcgactcctatataggaaacgtgctcatggtaggagaagta
ggtttagacggtagcattcgaccgacagtgaacgttacaaagcgtattgaaaacgcaaaa
aaactacagatagaaagaataatcatcccagctagtgttgattacaactccataaattca
aagtcggacttgaaagtagagcatgtgaaagatgtaagagacctttttgagcttgtgatg
tcagaaaagacggataaaatttga
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