Fervidobacterium pennivorans: Ferpe_0950
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Entry
Ferpe_0950 CDS
T01808
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fpe
Fervidobacterium pennivorans
Pathway
fpe03420
Nucleotide excision repair
fpe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ferpe_0950
03430 Mismatch repair
Ferpe_0950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpe03400
]
Ferpe_0950
Enzymes [BR:
fpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ferpe_0950
DNA repair and recombination proteins [BR:
fpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ferpe_0950
MMR (mismatch excision repair)
Other MMR factors
Ferpe_0950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
DEAD
ResIII
BfiI_DBD
Motif
Other DBs
NCBI-ProteinID:
AFG35060
UniProt:
H9UC17
LinkDB
All DBs
Position
1004570..1006516
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AA seq
648 aa
AA seq
DB search
MNQDKEVKEYKLENKNETTEKIISEIMNELDPEQRNAVLNSFGKSVVIAGPGSGKTRVIT
YKIAYLLGNGVKPSEILLVTFTRAAAREMIERAQKVAKRELTGMLAGTFHHVCNVLLRRY
GSSIGLKPNFTILDEDDSIDLMKLVRSRFVTSKQMSKALPTPNELYSLYSFMNNTLQTPY
EVIVKRAKRWVNVIDVIENIYKEYAIEKEKQNVLDYDDLLLKMLILLEEKPGVREHISSQ
FKWILVDEFQDTNILQLKIVQLLSQVHNNLFVVADDAQSIYSFRGARFENVREIMDGANV
FKIQTNYRSTDKIVELVNSMIPRSSVPKKLRAVRYSSQKPVVVNTYDHFDEARFVAQRII
EHVNDGANYSDIAVIYRAHSHSLELQLELSKNNIPFKLLSGLRFTETAHAKDVIAFLKIL
ENPYEVISWMRILKMLENVGDVKAEKIANEITSTEDPIGRFLSLNVKSANIDALKNVIYN
SLGKGPSEQIRNFYEGFYQSILEHHYQDFRDREEDIERLIEMASFYSSTEEFLSELIISE
AREAELDRNEDEGGKVTLTTVHQAKGLEWKIVFVIGVNPGDFPHFLALKDGSLDEEERLF
YVAITRAKDMLYITHSVFSRSDYFRTGKIERDFVEDIPPYLVEYWRVR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagacaaagaagttaaagaatacaagttagaaaataagaatgagacaactgag
aaaataatcagcgagataatgaacgagctcgatcctgagcaaaggaatgcagttttaaac
tcttttggtaagagtgtcgtcatagcaggtccaggtagcggaaagacacgtgtaattaca
tacaaaatcgcataccttctcggaaacggagtaaaaccttcagagatactcttggttaca
ttcactcgagctgcagcaagagagatgatagaacgagcacagaaagtagctaaaagagaa
cttactggaatgctcgcaggaacatttcaccatgtgtgtaatgtgttactcagacgttat
ggttcaagcataggtctcaaaccaaactttacaatccttgatgaggatgattccatagat
ttgatgaagttggtcagaagtcgttttgtaacctcaaagcaaatgagtaaagcacttcca
actccaaacgagctttactcactctattcttttatgaacaacacccttcaaactccctac
gaagtcatagttaaacgtgcaaaaagatgggtaaacgtcattgatgtgattgaaaatata
tataaggagtatgccattgaaaaagaaaaacaaaacgtcttagattacgacgatttgtta
cttaagatgcttattcttcttgaagaaaaacctggtgtgcgcgaacatatttcttctcag
ttcaaatggattttggttgatgaatttcaagatacgaacatcttgcagctgaaaatagtc
cagcttttgagtcaagtacacaacaatctctttgtcgtagccgacgatgcgcaaagtata
tactcattcagaggagcacgttttgaaaacgttagagaaatcatggatggagctaatgtg
tttaaaatacaaaccaactacagaagcactgacaaaatagttgagctggtgaattcgatg
ataccaaggtcatcggtgccaaaaaagttaagggcagttcgttacagttcccaaaaaccc
gtagttgttaatacttatgaccattttgacgaagcgcgatttgttgcccaaagaattatc
gaacatgtgaacgatggtgcaaactacagtgacatagcagtaatctacagagcacattct
cattcattggaattacagctggaactttcaaaaaataacatccctttcaaactactctca
ggtctcagatttacggaaactgctcatgcaaaggatgttatagcatttttgaagattttg
gaaaatccttacgaggttatttcatggatgagaatcttgaaaatgcttgaaaacgtagga
gacgtaaaagctgaaaaaattgcgaatgaaataacctcaacagaagatcctataggacga
ttcctaagtcttaatgttaaaagtgctaatatagatgcgctgaaaaacgttatctacaac
tcacttggtaaaggtccaagtgagcagataagaaatttctatgaaggtttctatcaaagc
attctcgaacaccactaccaagattttcgagacagggaagaagatattgaaagacttatt
gaaatggcatcattctacagctctacagaggaattcttaagcgagttaataatatctgag
gccagagaggctgaacttgatagaaacgaagatgaaggcgggaaggttacattgacaaca
gtccatcaagcgaaggggttagagtggaagatagtctttgtcataggtgtcaatcccggt
gattttccacactttttggctctgaaagatggttcacttgacgaagaagaaaggctgttt
tatgttgcaataaccagagccaaagatatgctttatataactcattccgttttttcccga
agtgactactttaggacaggaaaaattgaacgtgactttgttgaggatatacctccttac
ttagttgaatattggagggtcagatga
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