Fervidobacterium pennivorans: Ferpe_1046
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Entry
Ferpe_1046 CDS
T01808
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fpe
Fervidobacterium pennivorans
Pathway
fpe03030
DNA replication
fpe03430
Mismatch repair
fpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ferpe_1046
03430 Mismatch repair
Ferpe_1046
03440 Homologous recombination
Ferpe_1046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpe03032
]
Ferpe_1046
03400 DNA repair and recombination proteins [BR:
fpe03400
]
Ferpe_1046
Enzymes [BR:
fpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ferpe_1046
DNA replication proteins [BR:
fpe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ferpe_1046
DNA repair and recombination proteins [BR:
fpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ferpe_1046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AFG35153
UniProt:
H9UCB0
LinkDB
All DBs
Position
complement(1104943..1105512)
Genome browser
AA seq
189 aa
AA seq
DB search
MAWDDNVYCAVDIETTGIDPSGGDRIIEIAIVPIYKGKVVKDWIYTSLVNPKVSIQTYAQ
SVHKISIKDIQSAPGLEDVLSVVRKYSRDTVLVFHNARFDLTFLDYAAKEVGQLPLDVYY
IDTLEISKAVYGRGKKLETLATEMGITHKVTHRAYDDALVTANVFIKFFDMFGWERIHEF
LRRWMGREY
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtggcatgggatgacaatgtgtattgcgctgttgatatagaaacgacgggaatagacccg
tcaggtggggaccgtattatcgaaatagcaattgtgccgatatacaagggaaaagtagtt
aaagattggatttacacatctttggtcaacccaaaggtcagcatacagacttatgcacag
agtgtacacaaaatttcgataaaggatatacaaagtgcacctgggttagaggatgtatta
tcagtcgttagaaagtattccagagataccgtgttggtctttcataacgctcgttttgat
ttgactttccttgattacgctgcaaaagaagtcggacagcttcctctggatgtatattac
atagataccttggagatttcaaaagcagtatacggcaggggaaaaaagctggagacactg
gcaactgaaatgggtattacacacaaagtaacacatagagcatatgatgatgcgctagtg
accgcgaatgtatttatcaagtttttcgatatgtttggatgggagagaatccacgaattt
ctgaggcggtggatggggagggaatactaa
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