Fervidobacterium pennivorans: Ferpe_1078
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Entry
Ferpe_1078 CDS
T01808
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
fpe
Fervidobacterium pennivorans
Brite
KEGG Orthology (KO) [BR:
fpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpe03016
]
Ferpe_1078
Enzymes [BR:
fpe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Ferpe_1078
Transfer RNA biogenesis [BR:
fpe03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Ferpe_1078
Prokaryotic type
Methylthiotransferases
Ferpe_1078
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
AFG35183
UniProt:
H9UCE0
LinkDB
All DBs
Position
complement(1136986..1138284)
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AA seq
432 aa
AA seq
DB search
MRVSVITHGCKINQYESELMIEILENAGYVVLYGEDRGAEVYILNSCAVTSEAERKVRQT
IRHLRKLNPDAKIILTGCYVQIPRTAEEYKNLGVDLVLGNLEKKRILSFINKVGGYFNSR
YWEEDDISFEIVENSVTERSRAFVKVEDGCNNGCTYCVIRSLRGTKIRSKPLEVVVKEIE
KLVRKKHREIVITGLNLGKYGADLGLNLAQLLRTIAKIEGDFRIRLSSINPEDLTDELIE
VIAQEERICNHLHIPAQSGSTSVLRRMGRNYTADDFISRVLKLREFDPLFSITTDIMVGF
PAETDEEFKETLDFVKTVGFSKVHTFRYSQRPNTPAARFENQIPGNVKKERAEILIKHAD
NVAYEYRKKLVGKTTIVLVEGVQNGIAYGYDEYYLLHESSGGVTGEFSKVKICSVTNEGV
VSKVVQKYASNE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagagtctctgtaattactcatggttgtaagattaatcaatacgaaagtgaattaatg
atagaaatccttgaaaacgcgggatatgtagtactttatggcgaagacagaggagcagag
gtttatatactcaacagttgcgctgtcacgagcgaagcagagaggaaagttagacaaaca
atacggcatttaagaaagctcaatccagatgctaagataatactcacaggttgctatgtt
cagattcccagaacggctgaggaatacaaaaatttgggcgtagacctagtactaggaaat
cttgagaaaaagcgcatactaagcttcataaacaaagtaggaggttacttcaactcgcgt
tactgggaagaggatgatatatcgttcgagattgttgaaaactccgtaactgagcgttcc
cgggcttttgtgaaagtcgaagatggttgtaacaatggatgtacatactgcgttatacgt
tcgttgagaggtacaaagattagaagcaaaccgttggaggttgttgtcaaagagatagaa
aagcttgttaggaaaaaacacagagaaatagtaataacaggtttaaacttgggaaaatat
ggtgcagatttaggtttaaatcttgcacaattactcagaacgattgcaaagattgaagga
gattttagaattaggttgagctcgataaatcctgaggatttgacagatgagttgatagaa
gttattgctcaagaagagagaatttgtaatcatttgcatatccctgctcaaagtggaagc
acgagtgtgttgcgaaggatgggtagaaactatacggcggatgattttatctctcgagtt
ctcaaactcagagaatttgacccattgttttcgatcacgactgatataatggttggtttt
cctgcagaaacagatgaagaattcaaagaaactttagattttgttaaaaccgtagggttc
agcaaagtacatacctttagatattcgcaaaggcctaatacacctgctgcacgttttgaa
aaccaaattccagggaatgtaaagaaagagcgtgcagagattcttatcaagcacgcagat
aatgttgcatacgagtatagaaagaagcttgtaggtaagacaaccatcgtattggtcgaa
ggtgtgcagaatggaattgcttatggatatgacgaatactacttactccacgaaagcagt
ggtggtgtcacgggagaattttcaaaagtaaaaatatgttccgttacaaacgaaggcgtg
gtgtcgaaagttgttcaaaagtatgcatcaaacgagtga
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