Fervidobacterium pennivorans: Ferpe_1269
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Entry
Ferpe_1269 CDS
T01808
Name
(GenBank) putative domain HDIG-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
fpe
Fervidobacterium pennivorans
Brite
KEGG Orthology (KO) [BR:
fpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpe03019
]
Ferpe_1269
Messenger RNA biogenesis [BR:
fpe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ferpe_1269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
tRNA_anti_2
Cas3_HD
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
AFG35349
UniProt:
H9UCV6
LinkDB
All DBs
Position
complement(1313503..1314486)
Genome browser
AA seq
327 aa
AA seq
DB search
MNRFRETLEKLRSPYVEELRNWIDKEIDGIYKIKSKKLQEAKDGKKFLLLTLEDRTGSIR
AVDWYNAEANDEKLQVGHVVNVRGKVVYFEERVQINILNEQDAIKKLSENEYDIERFVKS
AENVEEMYKSVLRLIDTIRDEDYKTILQRFFVEDKNFVEMFKSSPAGMRIHHAYKGGLLE
HSLTVAKLVDSVCRIYNQFDRDLLVTGALLHDIGKVKEYTVNYNGIEVTTEGELVGHIII
GIEMLAQKARGISYEKFLKLKHLIASHHGEFEWGSPVLPKTPEALVLHFIENMDSKINRV
MQIIDKEDKEKDWSEYDSNLSRRFFLK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagattcagagaaactcttgaaaagcttaggtctccttatgtggaggaactgcgg
aactggatcgacaaagaaatcgatggaatatacaaaattaagagcaaaaaactccaagaa
gcaaaagatggtaaaaagttcctgcttttaacgttggaagacagaaccggaagcattcgg
gctgttgattggtacaacgctgaggcaaacgatgaaaaactccaggttggtcatgttgtc
aacgtcagaggaaaagttgtgtatttcgaggagcgtgtacagataaatatcttaaacgaa
caggacgctataaagaagctttctgaaaatgaatacgatattgaacgttttgttaagagt
gctgaaaatgttgaagaaatgtataaatcggttctcaggttgattgatacaatccgagac
gaagattacaaaacaatacttcaaagattctttgttgaggacaaaaattttgtagaaatg
tttaagagttcaccggcgggaatgaggatacatcacgcatataaaggtggattattggaa
cactcgctgaccgttgcgaaacttgtcgacagtgtttgtaggatttacaaccaatttgat
agagatttacttgtgacaggtgcgttgttacatgatattggaaaggtcaaggaatacaca
gttaattacaatggcatagaagtgacaacggaaggtgaattggtggggcatatcatcata
ggaatcgaaatgctagctcaaaaggcaaggggaatatcctatgagaagttcttgaaatta
aaacaccttattgcatcccatcatggtgaattcgagtggggctcgcctgtgttaccaaaa
accccagaggcacttgtgcttcactttattgaaaatatggattccaagattaatcgtgtg
atgcagataatagacaaggaggataaggaaaaagattggagtgaatacgactcgaatctt
agcagaaggtttttccttaaataa
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