Fervidobacterium pennivorans: Ferpe_1578
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Entry
Ferpe_1578 CDS
T01808
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fpe
Fervidobacterium pennivorans
Brite
KEGG Orthology (KO) [BR:
fpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpe03400
]
Ferpe_1578
Enzymes [BR:
fpe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Ferpe_1578
DNA repair and recombination proteins [BR:
fpe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Ferpe_1578
Prokaryotic type
Ferpe_1578
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFG35642
UniProt:
H9UDP9
LinkDB
All DBs
Position
complement(1632270..1633610)
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AA seq
446 aa
AA seq
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MFIYASDNVRELGGAKKWWLHKSLLSLIESLKSLGVKLIIRKGKDSSSVLKSLISEVHAD
SVYWNKRFDPLAKSRDENIKKELISSGINVECFDGFLLHNPNSFFTADGKPYGVFTPFWK
KFQNEIVVSAPLPVPERLQGVEFDVHLERLEDLNLLPKIKWYAEMENFWSVSEQDAQKRL
NWFISHALDGYGENRDRPDLDGTSLMSPYLASGLISPRQIWHSVVNSKKNGVSEGAEAFL
RELAWREFSYHVLYHNPDMVNANLKKEFDAFPWRWDKTDDYVKWTKGLTGIPIIDAGMRQ
LWKTGWMHNRVRMIVASWLTKNLLIHWKIGEEWFWDTLVDADIANNVQGWQWTAGCGADA
APYFRIFNPVLQSKKFDPKGMYIRKWVPELAKLPDEYIHEPWNAPVYLLKMIGLELGKDY
PLPMASIEETRKRALEAFEKIRRKNL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgtttatttatgcaagtgataatgtaagagaattaggtggagcaaagaaatggtggtta
cataagtcccttttaagtctgatcgaaagtttgaaaagtttaggagtaaaattgattatc
agaaaagggaaagattcttcatctgttttgaaaagtctaatcagtgaggtacacgccgat
tcggtttattggaataaacgttttgatccattggctaaatcaagggatgagaatataaag
aaagagttgatttcttctgggataaacgtcgaatgttttgacggctttttattgcataat
ccaaatagtttctttaccgccgatggaaagccatacggtgtttttaccccattctggaag
aaattccaaaacgaaattgttgtgtcagcaccgttacctgtaccagagcgtttgcaaggt
gtggagttcgatgttcatttagagcgtttagaagatttgaacttgttaccgaaaataaag
tggtacgctgagatggaaaatttctggagtgttagtgagcaagatgcacagaaacgtcta
aattggtttatctcacatgctttggatggttatggagaaaacagggatagaccagattta
gatggtacgtccttgatgtctccgtatcttgcaagtggtttgatttcgccaagacagatt
tggcattcggttgtaaatagtaaaaagaatggagtttcagaaggtgcggaggctttcttg
cgtgaattggcttggagagagttttcttaccatgttctttatcacaatcctgatatggta
aatgccaatttgaaaaaggaattcgatgcttttccttggagatgggataagacagatgat
tatgtgaaatggacaaagggtttgactggaattccgataatcgatgctggtatgcgtcag
ttatggaaaacaggttggatgcacaacagagtgcgcatgatagtggcttcttggttgacg
aaaaatcttctgatacattggaaaattggagaagaatggttttgggatacacttgtggat
gctgatattgctaacaacgttcaaggttggcaatggacagctggctgtggcgctgatgcg
gcaccgtattttaggatattcaatcctgttttacaatcgaaaaagtttgatccgaagggt
atgtacatcagaaagtgggtaccagaacttgcaaaacttccagacgaatacatacatgag
ccatggaatgcaccagtgtatttacttaaaatgataggtttagaacttggaaaagattat
ccgttacccatggcttcgatagaagaaacaagaaaaagggcgttggaagcttttgaaaaa
atcaggcggaagaacttatag
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