KEGG   Flavobacterium pectinovorum: Q1W71_00470
Entry
Q1W71_00470       CDS       T09245                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fpec  Flavobacterium pectinovorum
Pathway
fpec03030  DNA replication
fpec03430  Mismatch repair
fpec03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Q1W71_00470
   03430 Mismatch repair
    Q1W71_00470
   03440 Homologous recombination
    Q1W71_00470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpec03032]
    Q1W71_00470
   03400 DNA repair and recombination proteins [BR:fpec03400]
    Q1W71_00470
Enzymes [BR:fpec01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Q1W71_00470
DNA replication proteins [BR:fpec03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Q1W71_00470
DNA repair and recombination proteins [BR:fpec03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Q1W71_00470
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like CAF1 DEDDh_C
Other DBs
NCBI-ProteinID: WKL48257
LinkDB
Position
complement(106333..106959)
AA seq 208 aa
MSLFNFWKKEDDLFDENISIEETRFVVLDTETTGFDYDNDRILCIGALVLQNNMISIQDS
FEVYIQQDHYDKSTAQIHGILKDFVLKRPNELEALQQFLTFLGDSIIIAHHTIFDVTMIN
KALERNNLPALTNKTLDTAHLYKKTLIKSHLFERKDHYTLDDLADKFDISKKDRHTALGD
AYITAIAFLKIVKKLKEKKEINLNQVFK
NT seq 627 nt   +upstreamnt  +downstreamnt
atgagtttatttaatttttggaaaaaagaagatgatttatttgatgaaaatatcagtatt
gaagaaacgagatttgttgttttagatacagaaactacaggctttgattatgacaatgat
agaatactatgcattggcgccttggttttgcaaaataatatgatatcgattcaggatagt
ttcgaagtttacattcaacaagatcattacgacaaatcgactgctcagattcatggtatt
ttgaaagattttgtcttgaaacgtccaaatgaattagaagctttacagcaattcttaact
tttttaggcgattcaattattatcgcacatcacactatttttgatgttacaatgattaat
aaagcactggaaagaaataatttaccagctttaacaaacaaaactttagatacagcacat
ttgtataaaaagactttaattaaatcgcatttatttgaaagaaaggatcattatacatta
gatgatcttgctgataaatttgatatttctaaaaaagacaggcataccgctttaggcgac
gcttatattactgccattgcgtttttgaaaattgtaaagaaattaaaagagaaaaaagaa
attaatttaaatcaggttttcaaataa

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