Flavobacterium pectinovorum: Q1W71_00875
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Entry
Q1W71_00875 CDS
T09245
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fpec
Flavobacterium pectinovorum
Pathway
fpec00040
Pentose and glucuronate interconversions
fpec01100
Metabolic pathways
fpec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fpec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Q1W71_00875
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q1W71_00875
Enzymes [BR:
fpec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Q1W71_00875
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Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
WKL48334
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Position
complement(186178..187287)
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AA seq
369 aa
AA seq
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MKLKLNLSVLVLALTLGFTSCNTEEIASSTDASAVVETTPASGNLTAKIGNCAEVPGWAS
QNGGTTGGGSAAETTVTTYAQLKSAIESSSVKVIKVSGTITVTTRLSFQDQTGKTIYGAS
GAKLVSTNQTKDASGIINIKRCKNIIIRNLIFEGPGAYDTDGWDNAILDECTNVWVDHCE
FRDGVDGNFDIKNKSDYISVTYSKFHYLKPPKAGGSGGSDDHRYSNLIGSSDGATGDRGK
LRITFARCWWAPGCKERMPRVRFGKVHIVNSFFNSTVSNKCIAAGFEADIRVESNVFEGV
KTPIDLMTGYTAVTAADNVFTSTSGNQAGGSKTAFTPPYTIVKLAKTAVKADVSANAGPT
LGGNVCGSF
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaattaaatttgtcagtcttggtattggcacttactttaggttttacaagt
tgtaataccgaagaaattgcatcatcaacagatgcaagcgctgttgtagaaactacacct
gcttcgggtaatttgacagcaaaaattggaaattgtgcagaggttccgggatgggcttct
caaaatggtggaacaactggtggtggaagtgctgctgaaacaactgttactacttatgct
caattaaaatcagctatcgaaagcagctctgtaaaggttattaaagtgagcggaactatt
actgttacaaccagattgtcttttcaggatcaaaccggtaaaactatttatggtgcaagc
ggtgcaaaactggtttcaactaatcaaaccaaagatgcttctggaatcattaacatcaaa
agatgtaaaaacatcattatcagaaaccttatttttgaaggtcctggtgcttatgatact
gatggttgggataatgcaattcttgacgaatgtacaaatgtatgggttgaccactgcgaa
ttcagagacggtgtagacggaaactttgacatcaaaaataaatcagattatatttctgtt
acttattctaaattccactacctaaaaccaccaaaagctggaggttcaggaggatcagat
gatcacagatattctaacttaattggttcaagcgacggtgctacgggagatcgtggaaaa
ctaagaattactttcgctcgttgctggtgggctccgggatgtaaagaaagaatgccaaga
gttcgttttggaaaagtgcatatcgtaaacagtttctttaacagtactgtgagcaataaa
tgtatcgctgcaggttttgaagctgatattcgtgtagaatcaaacgtttttgaaggtgta
aaaactcctatcgatttgatgacaggttatacagctgttacagcagctgataatgttttc
actagtacatctggaaatcaggctggaggaagcaaaactgcctttacacctccgtacacg
atagtaaaacttgctaaaactgccgttaaagctgatgtttctgcaaatgcaggaccaact
ttaggcggaaatgtttgcggatcgttttaa
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