Flavobacterium pectinovorum: Q1W71_06640
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Entry
Q1W71_06640 CDS
T09245
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
fpec
Flavobacterium pectinovorum
Brite
KEGG Orthology (KO) [BR:
fpec00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Q1W71_06640
Enzymes [BR:
fpec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Q1W71_06640
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
WKL49461
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Position
complement(1512624..1514474)
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AA seq
616 aa
AA seq
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MKNKLLLIFLFLSGLLFAQRQMENLDRGVIAVKNNNQFFIGWRVLGTDPDDLAFNLYRKS
GAKKAVKLNEKPILGATNFIDTKANPKEENTWFVKTVLKGKETDAKGSFMIPAESPDKEY
LSIVLKPVEGYIPNDLSVGDLDGDGRYDLIVHMTGKAHDNSHTGITDPPIFQAYTLDGKF
LWQINLGKNIREGAHYTQFMVYDLDGDGISELVCKTADGTTDSANNVVGDASKDWVDREE
KSLTYGKILKGPEYLSVFNGRNGKLITTVDYIVERGDLAGWGGRGGSGGNDIKGNRIDRF
TACVAYLDGIHPSVVMCRGYYGRTVLAAWDFKNNKLTSRWVFDSKDAENPYSGMGNHGLT
VADVDNDGKDEIIYGAMCVDDDGKGLYTTGFRHGDALHVSDLDPDIPGLEAFGIHEIENG
TTGPGVTLFVAADGKVLFTDSPNEDVGRGVADNIDPTRKGAQCWWSGSPDLHDIKGKPIG
KAPTSTNFLIYWDGDSSRELLNANYIDKYNVGRLFTATGAASNNGTKSTPALSADILGDW
REELILRSEDNKELRIYSTTIPTEIRQYTLMHDPQYRLSIAWQNVGYNQPPHTSFYMGKD
MKPVPKPNIILMSVKK
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaacttttactaatcttcttgtttttatcaggtttactatttgcacaaaga
caaatggaaaaccttgaccgcggcgttatcgcagtaaaaaacaacaatcagttttttata
ggctggcgcgttttaggaacagatcctgatgatttggcttttaatttatatcgaaaaagc
ggagcaaaaaaagccgttaaattgaatgaaaaaccaattcttggagcgacaaattttatt
gatacgaaagcaaatcctaaggaagaaaatacctggtttgtaaaaacggttttaaaagga
aaagaaacggatgcaaaaggaagtttcatgattccggccgaaagtccagataaagagtat
ttgtcaattgttttaaaacctgttgaaggttatataccaaatgatctttcggtgggagat
ttagatggcgatggacgttacgatttgattgtacacatgacaggaaaagcgcatgataat
tcgcataccggaattacagatccgcctatatttcaggcttatactttggatgggaaattt
ttatggcaaataaatttagggaaaaatatccgcgaaggcgcacattatacacagtttatg
gtgtatgacttggatggtgacgggatttctgaattggtttgcaaaacggccgacggaaca
acagacagtgcaaataatgtagtaggcgatgcatcaaaagattgggttgacagagaagag
aaatcactaacttatggtaaaattttaaaaggtcctgaatatctttctgtttttaatgga
agaaacggaaaactgattacaacggttgattacatcgtagaaagaggtgatctcgcaggt
tggggcggaagaggaggcagcggaggaaatgatatcaaaggaaacagaattgatcgtttt
acggcttgtgttgcttatttagacggcattcatccgagcgttgtgatgtgtagaggttat
tacggaagaacggttttggcagcctgggattttaaaaataacaaactcacttcgagatgg
gtttttgatagtaaagatgccgagaatccgtattccggaatgggaaatcacggacttaca
gttgctgatgttgataacgacggaaaagatgaaattatttacggcgcaatgtgcgttgat
gacgatggaaaaggtttgtacaccacaggttttagacacggtgatgcgttgcatgtttct
gatcttgatcctgatattccgggtttggaagcatttggaattcatgaaattgaaaacgga
acaacaggtccgggagttactttgtttgttgctgcagatggcaaagttttatttacagat
tctccaaacgaagatgtcggtcgtggtgttgctgataatattgatccaacccgaaaagga
gcacaatgctggtggtctggatctcctgatttgcatgatataaaaggcaagccgattgga
aaagcgccaacatcaactaattttttaatttattgggatggagattcttcgagagaactt
ttgaatgctaattatattgataagtataatgttggcagattgtttacagcaacgggcgca
gcttcaaataacgggacaaaatcgactccggcgctttctgctgatattttgggcgattgg
cgtgaagagctgattttaagatctgaggacaataaagaattacgaatttactccaccaca
attccaaccgaaatcaggcagtatactttaatgcatgatccgcaatacaggttaagtatt
gcgtggcaaaatgtgggttacaaccagccgccgcatacgagtttttatatgggaaaagac
atgaaaccggtgccaaaacctaatattattttaatgtctgttaagaaatag
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