Flavobacterium pectinovorum: Q1W71_10810
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Entry
Q1W71_10810 CDS
T09245
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fpec
Flavobacterium pectinovorum
Brite
KEGG Orthology (KO) [BR:
fpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fpec03009
]
Q1W71_10810 (rimO)
Enzymes [BR:
fpec01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Q1W71_10810 (rimO)
Ribosome biogenesis [BR:
fpec03009
]
Prokaryotic type
ribosomal protein modification factors
Q1W71_10810 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
DUF5005
Motif
Other DBs
NCBI-ProteinID:
WKL50244
LinkDB
All DBs
Position
2656650..2657963
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AA seq
437 aa
AA seq
DB search
MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLRANGKEVQHEAPAAEEGNIIVINTCGFI
DNAKAESVNMILEYADKKDKGLVDKVFVTGCLSERYRPDLEKEIPNVDQYFGTTELPQLL
KALGADYKHELLGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGTHVSQPIEKLVKEA
QGLAKNGVKELILIAQDLTYYGLDIYKKRNLAELLEELAKVEGIEWIRLHYAYPTGFPMD
VLELMKREPKICNYIDIPLQHISDSILKSMRRGTTQAKTTQLLKDFRAAVPGMAIRTTLI
VGYPGETQEDFEILKDFVQEMKFDRMGCFAYSHEENTHAYLLEDDVPADVKQARANEIME
LQSQISWDLNQEKVGQVFKCIIDRKEGAHFVGRTEFDSPDVDNEVLIDASKHYVKTGEFV
NIRIIEATEFDLYGEPA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaagtctttaaaaaagaacaaaattaacgtaatcactcttgggtgttcgaag
aatgtatatgatagcgaagtgcttatgggacagcttcgtgcgaatggaaaagaagtacaa
cacgaagcaccagctgcagaagaaggaaatatcattgtaattaacacttgtggatttatt
gataatgcaaaagctgaatcagtaaatatgattttggaatacgctgataaaaaagacaaa
ggcttagttgataaagttttcgtaaccggatgtttatctgaacgttacagacccgattta
gaaaaagaaattccgaatgtagatcaatattttggtacaacagaattacctcagctattg
aaagccttaggagctgactataaacatgaactattaggagaacgtttaactacaactcct
aaaaattacgcttatttgaaaattgcagaaggctgtgacagaccatgcagtttttgtgca
attcctttaatgagaggtactcacgtttctcaaccaattgaaaaattagtaaaagaagct
caaggcttagctaaaaatggcgttaaagaattaattttaatagcgcaggacttaacttat
tatggtcttgatatttataaaaagagaaatcttgctgagcttttagaagaattagcaaaa
gtagaaggtatagaatggattcgtttgcactacgcctatcctaccggtttcccgatggac
gttttggaattaatgaaacgcgaaccaaaaatttgcaactatattgatattccgttacag
catatttctgattctattttgaaatcaatgcgtcgtggtacaactcaggcaaaaacaact
caattattgaaagatttccgtgctgcagttccgggaatggcaattagaactactttgatt
gttggatatcctggagaaactcaggaagattttgaaattttgaaagattttgttcaggaa
atgaaatttgacagaatgggttgtttcgcttattctcacgaagaaaacactcatgcttat
ttacttgaagatgatgttcctgccgatgtgaaacaagccagagccaatgaaattatggaa
ttacaatcacaaatttcatgggatttgaatcaggaaaaagttggacaggtatttaaatgt
attattgacagaaaagaaggtgcccattttgtgggaagaacagagtttgatagcccggac
gttgataatgaagttttaatagatgcatcaaaacattatgtaaaaacaggtgaatttgtt
aatataaggataattgaagctacagaatttgatttatacggagaacctgcttaa
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