Flavobacterium pectinovorum: Q1W71_12585
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Entry
Q1W71_12585 CDS
T09245
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
fpec
Flavobacterium pectinovorum
Brite
KEGG Orthology (KO) [BR:
fpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fpec03036
]
Q1W71_12585 (xerD)
Chromosome and associated proteins [BR:
fpec03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Q1W71_12585 (xerD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
WKL50536
LinkDB
All DBs
Position
complement(3062235..3063131)
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AA seq
298 aa
AA seq
DB search
MKWNTYIKDYQSYLRIERGLSKNTIENYGFDIERLCLFLETNRIEVSPINITDETVQEFI
YSVSKEVNPRSQARIISGLKSFFNYLIFEDYRKDSPLELIESPKTGRKLPDTLSVSEIDA
LIAAIDLSSNEGERNRAMLETLYGCGLRVSELVSLKISDLFFEEGFVKITGKGNKERFVP
IGKLTQKYIEIYQNSIRNTINIKKGFEDTLFLNRRGGQLTRSMIFAIIKNLALQINLHKN
ISPHTLRHSFATHLLENGADLRSIQLMLGHESITTTEIYVHLDRSFLKEVMHSFHPRK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaatacttatatcaaagattatcaatcgtatttacgcatcgaaagaggattg
tctaaaaatacaatcgaaaattacggtttcgatattgagcgattgtgtctttttttagaa
accaatcgaattgaagtttctcccataaatattactgacgaaacggtacaggaatttatt
tattcggtttcaaaagaagtaaatccacgttcgcaagcgagaataatttccgggttgaaa
agctttttcaattatttaatttttgaagattatagaaaagacagtccattagaattaatc
gaatcgccaaaaacaggacgtaagttgccggataccttatctgtttctgaaattgatgca
cttattgccgcgatagatttaagttcgaatgaaggcgagagaaaccgcgcaatgctggaa
actttatacggttgcggacttagagtttctgaactggtttcgcttaaaatttctgattta
ttttttgaagaaggttttgttaaaatcacaggtaaaggaaataaagagcgttttgttcct
attgggaaattaacgcaaaaatatattgagatttaccaaaactcaattcggaatacaata
aatatcaaaaaaggttttgaagatacgctgttcttaaatagaagagggggacagcttaca
cgttcgatgatttttgccattataaaaaatctggctctacaaatcaatctgcataaaaac
attagtccgcatacattgcgtcattcttttgcaacacatttgcttgaaaacggtgcagat
cttagatcaattcagttaatgcttggacatgagtcgattacaactactgaaatttatgtg
catttagatcgaagtttcctgaaagaagtgatgcattcttttcatccacggaaataa
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