Flavobacterium pectinovorum: Q1W71_13105
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Entry
Q1W71_13105 CDS
T09245
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
fpec
Flavobacterium pectinovorum
Pathway
fpec02024
Quorum sensing
fpec03060
Protein export
fpec03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Q1W71_13105 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Q1W71_13105 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q1W71_13105 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fpec02044
]
Q1W71_13105 (ffh)
Enzymes [BR:
fpec01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Q1W71_13105 (ffh)
Secretion system [BR:
fpec02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Q1W71_13105 (ffh)
Eukaryotic Sec-SRP protein
Q1W71_13105 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
cobW
AAA_17
AAA_33
nSTAND3
CbiA
CLP1_P
AAA_24
DUF5693
AAA_31
APS_kinase
SDH_protease
TsaE
NACHT
AAA_18
KTI12
6PF2K
KAP_NTPase
ATP_bind_1
NPHP3_N
AAA_16
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
WKL45897
LinkDB
All DBs
Position
complement(3165004..3166356)
Genome browser
AA seq
450 aa
AA seq
DB search
MFDNLSDKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTTKVKEKAI
GQDVLTTLQPGQLLVKLVKDELTELMGGDVAGINLSGTPSVILMSGLQGSGKTTFSGKLA
NFLKTKKNKKPLLVACDIYRPAAINQLHVVGDQIGVEVYSEPENKNPVEIAQNAIKHAKA
NGFNVVIVDTAGRLAVDQEMMDEIARVHKAIQPQETLFVVDAMTGQDAVNTAKAFNDILN
FDGVILTKLDGDTRGGAAISIKSVVNKPIKFVGTGEKMEAIDVFYPDRMAERILGMGDVV
SLVERAQEQFDEEEARKLQKKIAKNEFGFDDFLTQIQQVKKMGNMKDLVGMIPGASKAMK
DVEIEDDAFKHIEAIIHSMTPIERSKPAIIDVKRKARIAKGSGTKVEQVNQLMKQFDQMS
KMMKMMQGPGGKNLMKMMGGMKGMPGGMPR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaagtgataagttagataaagccttccatatattaaaaggacacggt
aaaattacagaagtaaacgttgccgataccttaaaagaagttcgtcgtgccttattagac
gccgatgttaactttaaaattgccaaagattttacaaccaaagtaaaagaaaaagcaatt
ggtcaggacgtattaacaacacttcagccaggacaattgttggtgaagttagtaaaagac
gaactaaccgaattaatgggtggtgatgttgcaggaattaatctttctggaactccttca
gttattttaatgtcaggattgcaaggttctggtaaaacgactttctctggaaaattagcc
aattttctaaaaacaaagaaaaataaaaaaccacttcttgtagcgtgtgatatctaccgt
cctgcggcgatcaatcagttgcatgttgttggagaccaaataggtgttgaggtttactca
gaaccggaaaataaaaatcctgtagaaattgctcaaaatgcaatcaaacatgcaaaagca
aacggttttaacgtcgtaattgtcgatacagccggtcgtttggcagtagatcaggaaatg
atggacgaaattgcacgtgttcacaaagcaattcagcctcaggaaacattgttcgttgtt
gatgcaatgacaggacaagatgctgtaaacacagcaaaagcattcaacgatatcctgaat
tttgatggagttattttaacgaagttagatggagatactcgtggtggagctgcaatctcg
attaaatcggttgtaaataaaccaatcaaatttgtgggtacaggcgagaagatggaagca
attgatgttttctatccagatcgtatggctgagcgtatcttaggtatgggagacgttgtg
tcgcttgtagaaagagcacaggaacaatttgatgaagaagaagccagaaaacttcaaaag
aaaatcgctaaaaacgaatttggttttgatgatttcctaacgcaaattcaacaagtgaaa
aaaatgggtaatatgaaagacctggtaggaatgataccgggagcttcaaaagccatgaaa
gatgtagaaatagaagatgacgcttttaaacatatagaagcaatcatacattcgatgacg
ccaatcgaaaggagtaaacctgccataatcgacgtaaaaagaaaagccagaatcgcgaaa
ggttccggaacgaaagtcgagcaagtaaatcagttgatgaagcagtttgaccaaatgagc
aagatgatgaagatgatgcaaggtccgggcggaaaaaacctgatgaaaatgatgggaggc
atgaaaggaatgccaggcggaatgccgagataa
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