Flavobacterium pectinovorum: Q1W71_13340
Help
Entry
Q1W71_13340 CDS
T09245
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fpec
Flavobacterium pectinovorum
Pathway
fpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q1W71_13340 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpec03019
]
Q1W71_13340 (recQ)
03400 DNA repair and recombination proteins [BR:
fpec03400
]
Q1W71_13340 (recQ)
Enzymes [BR:
fpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q1W71_13340 (recQ)
Messenger RNA biogenesis [BR:
fpec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q1W71_13340 (recQ)
DNA repair and recombination proteins [BR:
fpec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q1W71_13340 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
WKL45942
LinkDB
All DBs
Position
complement(3217857..3220052)
Genome browser
AA seq
731 aa
AA seq
DB search
MNSNEIEIHKELKKYFGFSQFKGLQEQVITSILGKKNTFVIMPTGGGKSLCYQLPALIQD
GTAIVVSPLIALMKNQVDAIRSLSSENGIAHVLNSSLTKTEITQVKKDITSGLTKLLYVA
PESLTKEEYVAFLQSVPISFVAIDEAHCISEWGHDFRPEYRNLKNIIKQLGQVPIIGLTA
TATPKVQEDILKNLDMSDASTFKASFNRPNLYYEVRTKTKNIESDIIRFIKQHKGKSGII
YCLSRKKVESIAEVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGID
KPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGHCLAYYSYKDVEKLEKFMSGKPVAEQE
IGFALLQEVVAYAETSMSRRKFLLHYFGEEFDSETGEGADMDDNVRNPKNKIEAKEQVVK
LLEIVRDTKHIYKSKEIVFTLIGRINAVIKAHKTDTQPFFGSGSDHDEKYWMALLRQVLV
TGYLSKDIETYGIIKITQEGLDYIKNPVSFMMSEDHEYNESEDEAIVTASKSSGTADEVL
MGMLRELRKKVAKKLGVPPFVVFQDPSLEDMALKYPISLTELYNIHGVGEGKAKKYGGDF
VTLINRYVEDNDIIRPDDLVVKSTGVNSANKLYIIQNIDRKLSLNDIASAKGLTMDALIK
EMEQIVYAGTKLNIKYWVDDLLDDDQQEEIHDYFMESESDKIEDALKEFDGDYDIDELRL
MRIKFISEVAN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaacgaaattgaaatacacaaggaattaaagaagtatttcggctttagccaa
tttaaaggcttgcaggagcaagtcattacgagtatcttaggtaaaaagaatacttttgta
attatgccaactggcggtggaaagtctctttgttatcaattacccgctttaattcaggac
ggaacagctattgttgtttctcctttaattgctttgatgaaaaatcaggttgatgccatt
cgaagcctttcttcagaaaacggaatagcgcatgttttaaattcctctcttaccaaaaca
gaaattacacaagttaaaaaagatattacatctggtttgacaaagcttttatatgttgcg
cccgagtctttaacaaaagaagaatatgtggcttttttacaaagcgtgcctatttcattt
gttgctattgatgaagcgcattgtatttcagaatggggtcatgattttaggccggagtac
agaaacctgaaaaatattattaaacaattgggacaggttcctattataggacttaccgca
actgcaaccccaaaagttcaggaagatattctaaaaaacctggatatgtctgatgcaagt
acttttaaagcatcgtttaacagaccaaatttatactacgaagttcgtacaaaaactaaa
aatatagaatcggatattattcgatttatcaaacaacacaaagggaaatcaggaattatc
tattgtcttagccgtaaaaaggtagagtcgattgccgaagttttacaagttaacggaatt
agtgccgtaccttatcacgcaggtttagatgccaaaacccgagccaaacatcaggatatg
tttttgatggaagatgtagatgttgtagtggcaacaatcgctttcggaatgggaattgat
aaaccagacgttcgttttgtaattcatcatgatattccaaaatcgctcgaaagttattat
caggaaaccggtcgtgccggtcgcgatggaggagaaggacattgtttggcttattactct
tataaggatgtagaaaagctggaaaaatttatgtcaggaaaaccagttgcagaacaggaa
attggatttgctctcctgcaggaagttgtggcttacgctgaaacctcaatgtcacgccga
aaattcttattgcattattttggtgaagaatttgacagcgaaaccggagaaggtgcagat
atggatgataatgttcgtaatcctaaaaataaaattgaagccaaagagcaggtcgttaaa
ttgctggaaattgttcgcgatacgaaacatatttacaaatcaaaagaaattgtatttacc
ttaattggtcgtataaatgcggtaattaaagcacataaaacagatacacagccgtttttt
ggttcaggttcagatcatgacgaaaaatactggatggctttacttcgacaagttttagtt
accggttatctgtcaaaagatattgaaacgtacggaatcataaaaattactcaggaagga
ttagattatattaaaaatccggtttcattcatgatgtctgaagatcacgaatataacgaa
tctgaagatgaggcaatcgtaacagcatcaaaatcatccggtactgcagatgaagtctta
atgggaatgttgcgtgaactgcgcaaaaaggttgctaaaaaattaggagttcctccgttt
gtcgtttttcaggatccttctcttgaagacatggctttaaaatacccaattagtttaaca
gaattgtacaacattcatggtgttggtgaaggaaaagccaaaaaatatggtggcgatttc
gtaacgcttattaatcgttatgttgaggataatgacatcattcgtccagacgatttagtg
gtaaaatctaccggagtaaattctgccaataaattatatattattcaaaacattgacagg
aaattatctttaaatgatattgcttctgccaaaggactcacaatggatgctttgattaaa
gagatggagcagatcgtttatgccggtactaaattaaatattaaatattgggttgacgat
ttacttgatgatgatcagcaggaagaaattcacgattatttcatggaatcagaatcagat
aaaatagaagacgctcttaaggaattcgatggcgattatgatattgatgaattgcggtta
atgagaattaaatttatcagcgaggttgcgaactaa
DBGET
integrated database retrieval system
