Flavobacterium pectinovorum: Q1W71_15335
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Entry
Q1W71_15335 CDS
T09245
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fpec
Flavobacterium pectinovorum
Pathway
fpec03410
Base excision repair
fpec03430
Mismatch repair
fpec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q1W71_15335 (recJ)
03430 Mismatch repair
Q1W71_15335 (recJ)
03440 Homologous recombination
Q1W71_15335 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpec03400
]
Q1W71_15335 (recJ)
DNA repair and recombination proteins [BR:
fpec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Q1W71_15335 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Q1W71_15335 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Q1W71_15335 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
LsmAD
Motif
Other DBs
NCBI-ProteinID:
WKL46326
LinkDB
All DBs
Position
3671092..3672792
Genome browser
AA seq
566 aa
AA seq
DB search
MRWTLKPKPSEDKIKHLAQALNVEDFVATLLIQRGIETFDDAKNFFRPSLEHLHDPFLMK
DMDKAVARIELAIKNQENILVFGDYDVDGTTAVSLVSAYLKSHYPNIATYIPDRYDEGYG
ISFKGIDFADDNGFSLIIALDCGIKSIDHIAYAKEKNIDFIICDHHRPGNILPDAVAILD
PKREDCDYPYDELCGCGVGFKLIQALGKNRNETIEDLVPYLDLVATAIAADIVPITGENR
VLAYFGLQVINSDPRPGIKALVHQVKKKTLDITDVVFIISPRINAAGRIKHGNHAVELLT
EFNFEQAQQFASEIEQYNSDRKDLDKRITKEAFQQILENQEEERFSTVVFQEDWHKGVIG
IVASRLIETYYRPTLVFTKSGDKYAASARSVKGFDVYNALDACAEHLEQFGGHMYAAGMT
LKAENYTIFKEAFEKQVSATILPEMRTPEIEIDAEINFSDITPKLIRILKQFEPFGPQNM
TPVFMTTNIKDTGYAKTLGADEEHLRLFVKQNNSEGIAAIGFGLGKKIDITKNQNTFQLA
YSLAENEWNGNVSTQLMLKDIRTNDK
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggacattaaaaccaaaaccttctgaagataaaatcaaacatttggcgcaagcc
ttaaatgtagaagattttgtagcaacacttttgattcagcgtggcattgaaacttttgac
gatgccaaaaatttctttcgcccttcattagaacatctccacgatccgttcctgatgaaa
gacatggacaaagcagttgcccgaattgaactggctattaaaaatcaggaaaacatcttg
gtttttggtgattatgatgtcgacggaacaacggcggtttctttggtttctgcgtattta
aaatctcattatcccaatattgccacttatattccggatcgttatgatgaaggttacgga
atttcttttaaagggattgactttgccgatgataacggattctctctaattatcgcgctc
gattgcggcataaaatccatagatcatatcgcctacgcgaaagaaaaaaacatcgatttt
attatttgcgatcaccacagaccgggaaatattcttcctgatgcggttgcgattctagat
cccaagagagaagattgcgattatccgtatgatgagttgtgcggttgcggtgttggtttt
aaactaattcaggctttagggaaaaaccgaaatgaaactattgaagatctggttccgtat
ctggatttggttgccacggcaattgctgcagatattgttccgattacgggagaaaatcgc
gttttggcttatttcggattacaggttattaactcagatccaagaccgggaattaaagct
ttggttcatcaggtaaaaaagaaaactttagatattactgatgttgtttttatcatttcg
ccaagaataaatgctgccggaagaattaaacacggtaatcatgcggttgaattgctaact
gaatttaattttgaacaagcgcagcaatttgcttcagaaatagaacaatacaactcagac
cgaaaagatttagacaaaagaattacgaaagaagcgtttcagcaaattctggaaaatcag
gaagaagaacgattctctactgttgtttttcaggaagattggcacaaaggcgtgatcgga
atcgtggcttcacgattaatagaaacctattatcgcccgacattggtttttaccaaaagc
ggtgataaatatgcagcttcggcacgatctgtaaaaggctttgatgtttacaatgcctta
gatgcgtgcgctgaacatttggaacaatttggaggccatatgtatgctgccggaatgact
ttgaaagccgagaattatacaatttttaaagaggcttttgaaaaacaggtttcggcaact
attttacctgaaatgcgaactcctgaaatcgaaattgatgcagagattaatttctctgac
ataacaccaaaactcattcggattttaaaacaatttgaaccttttggaccgcaaaacatg
acacctgtttttatgacaacaaatataaaagacacaggttatgccaaaactctgggagca
gacgaagaacatttaaggctttttgttaagcagaataattcggaaggaattgctgcaata
ggttttggccttggaaaaaaaatagacatcacaaaaaatcaaaatacatttcagttagct
tattctctggccgaaaatgaatggaacggaaacgtttcgactcaactaatgcttaaagat
attagaacaaatgacaaataa
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