Flavobacterium pectinovorum: Q1W71_18425
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Entry
Q1W71_18425 CDS
T09245
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
fpec
Flavobacterium pectinovorum
Pathway
fpec00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fpec00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Q1W71_18425 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fpec01007
]
Q1W71_18425 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpec03016
]
Q1W71_18425 (aspS)
03029 Mitochondrial biogenesis [BR:
fpec03029
]
Q1W71_18425 (aspS)
Enzymes [BR:
fpec01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
Q1W71_18425 (aspS)
Amino acid related enzymes [BR:
fpec01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Q1W71_18425 (aspS)
Transfer RNA biogenesis [BR:
fpec03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Q1W71_18425 (aspS)
Prokaryotic type
Other AARSs
Q1W71_18425 (aspS)
Mitochondrial biogenesis [BR:
fpec03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Q1W71_18425 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
DUF6478
MTH865
Motif
Other DBs
NCBI-ProteinID:
WKL46927
LinkDB
All DBs
Position
complement(4424248..4425999)
Genome browser
AA seq
583 aa
AA seq
DB search
MYRSHNCGELNASNINTEVTLAGWVQKSRDKGFMNWVDLRDRYGITQLIFDESRTDKTVF
ELAKTLGREFVIQVKGTVIEREAKNKNIPTGEIEILVSELNILNAALTPPFTIEDETDGG
EDIRMKYRYLDIRRNPVKNSLLFRHKVAMEVRKYLSDLDFCEVETPYLIKSTPEGARDFV
VPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMA
FVEQEDILNVFEGLTRHLLKEIKGIEVDKFPRITYDYAMKTYGNDKPDIRFGMEFGELNE
FAKHKDFPVFNAAELVVGIAVPGAGNYTRKEIDGLIDWVKRPQVGASGMVYSKCNDDGTF
KSSVDKFYDQDDLAQWAKITGAKPGDMIFVLSGPADKTRGQLSALRMELATRLGLRKPEE
FAPLWVVDFPLLELDEESGRYHAMHHPFTSPKPEDMHLLETEPGKVRANAYDMVLNGNEI
GGGSIRIHDKATQQLMFKYLGFTEDEAKAQFGFLMDAFQFGAPPHGGLAFGLDRLVAILG
GQETIRDFIAFPKNNSGRDVMIDAPAKIDDAQLKELHIKVDTI
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaagtcataattgcggcgagttaaacgcttcaaatattaataccgaggttaca
cttgcaggttgggttcaaaaatcacgcgataaaggatttatgaattgggttgatttacgc
gaccgttacggaattacgcaacttattttcgacgaaagccgtactgataaaaccgttttt
gaactggctaaaacacttggtagagagtttgtgattcaggtaaaaggaactgttattgag
cgagaagccaaaaacaagaacattccgactggtgaaatcgaaattttagtttctgaactg
aatattttaaatgcagcattaacgcctccatttacaattgaagatgaaactgatggcggt
gaagatatcagaatgaaataccgttacttggatattcgtcgtaatcctgtaaaaaacagt
ttattattccgtcataaagtagcgatggaagttcgtaaatatctatctgatttagatttc
tgcgaagtagaaactccttacttaattaaatcgactccggaaggcgcaagagatttcgtt
gttccaagtagaatgaacgaaggacaattttatgcattgccacaatctccacaaactttt
aaacaattgttgatggtgggtggaatggataaatatttccaaatcgtgaaatgtttccgt
gatgaagatttacgtgcagaccgtcagcctgagtttacacaaatcgattgcgaaatggca
tttgtggaacaagaagacattttgaatgtttttgaaggtttgacaagacatttactaaaa
gaaattaaaggtattgaagtagataaattccctagaattacctacgattatgccatgaaa
acatatggaaatgacaaaccggacattcgtttcggaatggaatttggagaattaaacgaa
tttgcaaaacacaaagatttccctgtattcaacgcggcagaattagtagttggaattgca
gttccgggagcaggaaattatacccgtaaagaaattgacggattaattgactgggtaaaa
cgtccgcaagttggagcatcaggaatggtatattcaaaatgtaatgacgacggaactttt
aaatcatctgtagataaattttacgatcaggacgatttagcacaatgggcaaaaattaca
ggagcaaaacccggagatatgatttttgtactttcaggtcctgccgataaaactcgtgga
cagctttctgcacttcgtatggaattagcaactcgtttaggattgcgtaaaccagaagaa
tttgcacctttatgggttgtagatttcccattattagaacttgatgaagaaagtggccgt
tatcatgcaatgcaccacccgtttacatctccaaaaccagaagacatgcatttgttggaa
actgaaccaggaaaagttcgtgcaaacgcttatgatatggttttaaacggaaatgaaatt
ggcggaggttctattcgtattcacgataaagcaacacaacaattgatgtttaaatattta
ggttttaccgaagatgaagcaaaagcacaatttggcttcttaatggatgcgtttcaattt
ggagcaccgccacacggaggtctggcttttggtttagacagattggttgccattttagga
ggacaagagactattagagactttattgctttcccaaaaaacaattctggtcgtgatgta
atgattgatgcaccagctaaaattgatgatgctcaattaaaagaacttcatattaaagta
gatacaatataa
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