Flavobacterium pectinovorum: Q1W71_19440
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Entry
Q1W71_19440 CDS
T09245
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
fpec
Flavobacterium pectinovorum
Pathway
fpec02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fpec00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Q1W71_19440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpec03021
]
Q1W71_19440
Transcription machinery [BR:
fpec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q1W71_19440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
PgaD
DUF6285
GPW_gp25
Motif
Other DBs
NCBI-ProteinID:
WKL47123
LinkDB
All DBs
Position
complement(4655917..4656780)
Genome browser
AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQRALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKMYALLEQSNERPPSAEEIAKELDMTVNDVKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPNPDRELIHESLRTEIERSLETLTPREADVVRLYFGL
GDQHPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaatcaccaagcaggtaaccaatcgtgaaactgcatcgttagataaa
tatctacaagaaatcggaaaagttgacctaattaccgctgatgaagaggtagaattagca
caaagaataaaggctggtgatcaaagagctttagaaaaacttacaaaagccaacctacgt
ttcgtagtatcggttgctaaacaatatcaaaatcaaggattaacacttcctgatttaatt
aacgaaggaaacttaggtttaattaaagcagctcaacgttttgatgaaactcgtggtttc
aaatttatctcttatgcagtatggtggattcgtcaatcgatccttcaggctttggcagaa
caatcacgtattgttcgtttaccattaaacaaaattggttctatcaataaaatcaacaaa
atgtatgcgttattagagcaatctaacgagcgtccgccttctgctgaagaaattgcaaaa
gaactagacatgactgtaaatgacgtaaaagagtctatgaaaaactctggtcgtcactta
tcaatggatgcacctcttgttgaaggagaagattctaacctttacgacgttttacgttct
ggagaatctccaaacccggacagagaattaattcatgaatcattacgtactgaaattgaa
cgttcattagaaacattaactcctagagaggcagatgttgttcgtttatattttggcctc
ggagaccaacacccaatgactttagaagaaattggagaaactttcgatctaactcgtgag
cgtgttcgtcagattaaagaaaaagcaatccgcagattaaaacatacttctagaagtaaa
atcttaaaaacatatttaggataa
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