Flavobacterium pectinovorum: Q1W71_20640
Help
Entry
Q1W71_20640 CDS
T09245
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
fpec
Flavobacterium pectinovorum
Brite
KEGG Orthology (KO) [BR:
fpec00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Q1W71_20640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_AprE
Beta-barrel_YknX
HH_MFP_RND
BSH_CzcB
CzcB_C
BSH_LcnD
BSH_CusB
Beta-barrel_RND_2
YknX_C
RND-MFP_C
HH_YBHG
HH_CzcB
HH_EMRA
OEP
Biotin_lipoyl
LcnD_C
VAS1_LD
Motif
Other DBs
NCBI-ProteinID:
WKL47358
LinkDB
All DBs
Position
4956699..4957991
Genome browser
AA seq
430 aa
AA seq
DB search
MSKKTVYFLLGGAIVIIAVLVSLSKSGVIGNKDEGKEVETSKVVASTIVETVSATGKIQP
EIEVKISPEVSGEIILLNIKEGQVVKKGDLLVKINPDLYTSSYNRSVSNLSGSKAGLSQS
EASFKEAKASYERNKILYDKGVISKSDWDKAIASFEVAKATKQNAYFTVQSASASVNEAK
DNLGRTTIYAPADGTISVLNVELGERVLGTQQMAGTELLRVANLNNMEVEVDVNENDIVK
IKIGDEANVEVDAYLKKKFRGVVTSISNSASTTLTSDQVTNFKVKVRILKESYQDLLEGQ
PNTYSPFRPGMTATVDIITKTKTNVLAVPISSVVVKSDTTAVKDFKVEDPNEDKKATPKS
DKKFECVFVKVGDKAKIKIIKTGIQDDTNIEVMSGLKPGDVVITGPYTTVSKELNSGDKV
KLKKAETPKK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaaaacagtttatttcttattaggaggcgcgatagttatcattgccgtttta
gttagtctttcaaaatcaggggtaataggaaataaggatgaaggaaaagaagtagagact
tcaaaagttgtagcttcaactattgtagaaaccgtttcggcaacaggtaaaattcaaccg
gaaatagaagttaaaatctcacctgaagtttcgggtgagattattttattaaatataaaa
gaaggtcaagtagttaaaaaaggtgatttattagtcaaaataaaccccgatttatatacc
tcaagttacaatcgttcagtatctaatttatctggaagtaaagccggattaagccagtct
gaagcatcttttaaagaagcaaaagcaagctacgaacgtaataagatattatatgataaa
ggtgttatttcaaaatctgactgggataaagccatagcctcttttgaagttgcaaaagcc
actaaacagaatgcttattttacggttcaaagtgcttctgcttctgtaaatgaagcaaaa
gacaatcttgggcgcactactatttacgctcctgcagatggaacaatttcagtattaaat
gtagagttaggcgaacgtgttttgggaacgcagcaaatggccggaacagaacttttaaga
gttgccaacctaaacaacatggaagttgaagttgatgtaaatgaaaatgacatcgtaaaa
atcaaaattggtgacgaagcaaatgtggaagtggatgcttatttaaaaaagaaatttaga
ggtgttgtaaccagtatttctaactcagcaagtacaactttaacatcagatcaggttacg
aattttaaagtaaaagttagaattttaaaagagtcatatcaggatttattagaaggtcaa
cctaatacatattctccttttagaccaggaatgacggctacagttgatattattacaaaa
acaaaaacgaatgttttggcagtgccaattagttctgttgtagtaaaatctgatacaacg
gcagttaaggattttaaagtagaagatccaaacgaagataaaaaagcaactccaaaaagc
gataaaaaattcgaatgtgtttttgtaaaagtaggtgataaagctaaaatcaaaatcata
aaaacaggtattcaggatgataccaatatcgaagtaatgtctggtttaaaacctggagat
gttgttattacaggtccttatacaactgtttctaaagaattaaattctggagataaagta
aagcttaaaaaagccgaaacacctaagaaataa
DBGET
integrated database retrieval system
