Flavobacterium pectinovorum: Q1W71_21525
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Entry
Q1W71_21525 CDS
T09245
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fpec
Flavobacterium pectinovorum
Brite
KEGG Orthology (KO) [BR:
fpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpec03032
]
Q1W71_21525 (topA)
03400 DNA repair and recombination proteins [BR:
fpec03400
]
Q1W71_21525 (topA)
Enzymes [BR:
fpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Q1W71_21525 (topA)
DNA replication proteins [BR:
fpec03032
]
Prokaryotic type
DNA Topoisomerases
Q1W71_21525 (topA)
DNA repair and recombination proteins [BR:
fpec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Q1W71_21525 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
DUF4294
Poly_export
Motif
Other DBs
NCBI-ProteinID:
WKL47526
LinkDB
All DBs
Position
5141639..5144155
Genome browser
AA seq
838 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGSDFQVESSYGHIADLPSKEIGVDVENGFKPKYEVSPDK
KALVSKLKTLSKNAEMVWLASDEDREGEAISWHLAEELKLDVKKTKRIVFHEITKSAILK
AIDNPREIDYNLVNAQQARRVLDRLVGYELSPVLWRKIKGGLSAGRVQSVSVRLIVERER
EIQNFNAVASYSVVAEFVNEAGKAFKAKLPKNFNTKKEAEDFLKQNIGSQYKVADLETKP
TKKSPTAPFTTSTLQQEAARKLYLPVGITMQLAQRLYEAGLITYMRTDSVNLSKDAMDAA
EAEIIKSYGKEFSKPRTFANKSKGAQEAHEAIRPTDMSRHTVNIDRDQARLYDLIWKRTL
ASQMSDAQLERTNVKIEANNHDELFTASGEVLLFEGFLKVYLEGHDDDEEEQEGMLPALK
VNEKLANNYITATERYSRPPARYTEASLVKKLEELGIGRPSTYAPTISTIINRNYVEKGT
LEGQERNYTQLTLQTGKVGEKLLKENTGSDKGKLVPTDIGTIVTDFLVKNFGNILDYNFT
AKVEQDFDEIAEGNIDWATMMQEFYNKFHPNVKEVEANAERESGERILGKDAEGRQVSVR
LGKFGPMAQIGEADDEDKKFASLMSDQNIGNITLEEALNLFLLPKSLGEYKGEEVEVSNG
RYGPYVRHGSVFISLPRGEDPLGVSKERAQELIDEKALADAPIAVYKGEAVQKGVGRFGP
FIKWNGLFVNVSKKYNFDNLSQQDVEDLIEDKLQKNIDKVLHNWEDEGILVEKARWGRSV
ITKGKIKIELSKDVDATQLTLAQVQEMIAAKTPAKKTPAKKATTAKKAPAKKAAAKKK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtaatagtggaatcacctgcaaaggcgaaaacgatagagaaattt
ctaggaagtgattttcaggtcgagtctagttatgggcacatagccgacttaccatcaaag
gaaataggggtagatgttgaaaatggatttaaacctaaatatgaagtttctcctgataaa
aaagccttagtaagtaaattaaaaacactatctaaaaatgccgaaatggtttggttggca
agtgatgaggaccgcgaaggagaagctatttcatggcacttggcggaagaattaaaacta
gatgtaaaaaaaaccaaacgaattgtttttcacgaaattaccaaatctgcgattcttaaa
gcaatcgacaatccacgagaaattgattataatttagtaaatgcacaacaagcacgtcgt
gttttagatcgtttagtaggttatgaattgtctcctgttttgtggagaaaaattaaaggc
ggactttctgctggacgtgtacagtctgtttcggttcgtttgattgttgaaagagaacgt
gaaattcaaaattttaatgcagttgcaagttattctgttgttgcagaattcgtaaatgag
gcagggaaagcttttaaagctaaattgccaaaaaatttcaatactaaaaaagaagccgaa
gatttcttaaaacaaaacatcggatcacaatataaggtagcggatttagaaactaaacct
accaaaaaatctccaacagcaccatttacaacctctacacttcaacaagaagcagcgaga
aaattgtatttgccggtaggaattaccatgcagcttgcacagcgtttatacgaagcggga
cttattacttatatgagaacggatagtgtgaacctttctaaagatgcaatggatgctgcc
gaagctgaaattataaaatcgtacggaaaagagttttcaaaacctcgaacttttgctaat
aaaagcaaaggggcacaagaagcgcacgaagcaattcgtccgactgatatgtcacgtcat
accgtaaatattgatcgtgatcaggctcgtttatacgatttgatctggaaaagaacattg
gcgtctcaaatgagtgatgcacaattagaaagaacaaacgtaaaaattgaagcaaataat
cacgatgaactttttacagcatcgggagaagttttactttttgaaggtttcctgaaagtt
tatcttgaagggcatgatgatgatgaggaagaacaagaaggaatgttgcctgctttaaaa
gtaaacgaaaagttagccaataactatattacagctacagaacgatattcaagaccaccg
gctcgttatacagaagcttctttggtaaaaaaattagaagaattaggaattgggcgtccg
tctacgtatgcaccaactatttcgactatcatcaacagaaattatgttgaaaaaggaact
cttgaaggtcaggaacgtaattatacacaacttactttgcaaacaggtaaagtaggagag
aagttactgaaagaaaatacaggttctgataaaggaaaattagttccaacagatatcgga
acaattgttactgatttcttggttaaaaatttcggaaatatccttgattataattttaca
gcaaaagtagaacaggattttgacgaaattgctgaaggaaatattgactgggcaaccatg
atgcaggaattctacaataaatttcacccaaatgtaaaagaagttgaagctaacgcagaa
cgcgaaagcggagaaagaattttgggtaaagatgcagaaggaagacaagtatctgtacgt
ttaggaaaattcggtccgatggctcaaattggagaagcagatgatgaagataagaagttt
gcaagcttaatgtctgatcagaatattggaaacataacacttgaagaagctttaaattta
ttcttgcttcctaaaagtttaggtgaatataaaggagaagaagtagaggtgagtaatggc
cgttatggaccttacgtgcgtcatggaagtgtttttatttccctgccaagaggagaagat
ccgcttggagtttctaaagaaagagctcaggaattaattgacgaaaaagcacttgctgat
gcgccaattgcagtatataaaggagaagctgttcaaaaaggtgtgggacgttttggtcct
ttcattaaatggaacggtctttttgtaaacgtaagcaaaaaatacaattttgataattta
tcgcaacaagatgttgaagatttaattgaagataaattacaaaaaaatatagacaaagtt
cttcataattgggaagacgaagggattttggttgaaaaagcacgttggggtcgttcggtg
attacaaaaggtaagatcaaaattgaattaagcaaagatgttgatgctacacaattgaca
ttggctcaggttcaggaaatgattgcagctaaaactccggcaaaaaaaacaccagcaaaa
aaagctacaaccgcaaaaaaagcaccagctaaaaaagcagctgcaaaaaagaaataa
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