Fusobacterium periodonticum: C4N17_05365
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Entry
C4N17_05365 CDS
T06291
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
fpei
Fusobacterium periodonticum
Pathway
fpei02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fpei00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C4N17_05365 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpei03021
]
C4N17_05365 (rpoD)
Transcription machinery [BR:
fpei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C4N17_05365 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
BUD22
Motif
Other DBs
NCBI-ProteinID:
AVQ25172
UniProt:
A0AAD0MQ45
LinkDB
All DBs
Position
complement(1078237..1079625)
Genome browser
AA seq
462 aa
AA seq
DB search
MKEIIRTKKGREFVNEVREKKKTTYEEINKCFSKDYTEEQINELVKIFLEEGIEVLSETE
TKAKSKTKAKTKSKAKAKEEAKAELDEEKDLNEKEKVEIEETEEKELDEEEDEEKDDDEE
IEEKELDDEYVEEETDDSLDDEEKDDDDVDTDTFIGFEDEFNPDYIEDISEEELSNEKLL
NLGNSAKVDEPIKMYLREIGQVPLLTHDEEIEYAKRAYEGDEEASQKLIESNLRLVVSIA
KKHTNRGLKLLDLIQEGNIGLMKAVEKFEYTKGYKFSTYATWWIRQAITRAIADQGRTIR
IPVHMIETINKIKKESRIYLQETGKDASPEILAERLGMEVEKIKAIQEMNQEPISLETPV
GSEEDSELGDFVEDQKTTSPYEATNRAILREELDGVLKTLSPREEKVLRYRYGLDDSSPK
TLEEVGKIFNVTRERIRQIEVKALRKLRHPSRKKKLEDFKVD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagagataataagaacaaaaaaaggaagagagttcgtaaacgaagtaagagaaaag
aaaaaaacaacttatgaagaaataaataaatgtttcagtaaagattacactgaggaacaa
ataaatgaattagttaaaattttcttagaagaaggaatagaagtattaagtgaaactgaa
actaaagctaaaagtaaaactaaagctaaaactaagtcaaaagcaaaggctaaagaagaa
gctaaagctgaattagatgaagaaaaagacttaaatgaaaaagaaaaagttgaaatagaa
gaaactgaagaaaaagaattagatgaagaagaagatgaagaaaaagatgatgatgaggaa
attgaagaaaaagaattagatgatgagtatgttgaagaagaaacagatgactcattagat
gatgaagaaaaagatgatgatgatgtagacacagatactttcatagggtttgaagatgaa
tttaatcctgattatattgaggatataagtgaggaagaacttagtaatgaaaagttacta
aatttaggaaatagtgcaaaggttgatgaacctataaagatgtatttaagagaaataggt
caagttccactattaactcatgatgaagagattgaatatgctaaaagagcttatgaaggt
gatgaagaagcaagtcaaaaacttatagaatcaaacttaagacttgttgtaagtattgct
aaaaagcatacaaacagaggtttaaaacttcttgatttaatacaagaaggtaatatagga
cttatgaaagcggttgaaaaatttgaatatacaaaaggatataaattttcaacttatgca
acttggtggataagacaagctataacaagagcgatagctgaccaaggaagaacaataaga
atacctgttcatatgatagaaactataaataagattaaaaaagaatcaagaatatattta
caagaaactggaaaagacgcttctcctgaaattttagctgaaagattagggatggaagtt
gaaaagataaaggctattcaagaaatgaatcaagaacctatatctcttgaaactccagtt
ggaagtgaagaagatagtgaattaggagatttcgttgaagaccaaaagacaacaagtcct
tatgaagctacaaatagagcaattttaagagaagagttagatggagtcttaaaaacattg
agtccaagagaagaaaaagttttaagatatagatatggacttgatgatagttcacctaaa
acattggaagaagttggaaaaatctttaatgttaccagagaaagaattagacaaatagaa
gtcaaagctcttagaaaattaagacatccaagcagaaagaaaaagcttgaagattttaag
gttgactag
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