Fusobacterium periodonticum: C4N17_06445
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Entry
C4N17_06445 CDS
T06291
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fpei
Fusobacterium periodonticum
Pathway
fpei03420
Nucleotide excision repair
fpei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C4N17_06445
03430 Mismatch repair
C4N17_06445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpei03400
]
C4N17_06445
Enzymes [BR:
fpei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4N17_06445
DNA repair and recombination proteins [BR:
fpei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C4N17_06445
MMR (mismatch excision repair)
Other MMR factors
C4N17_06445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
DEAD
PcrA_UvrD_tudor
CarD_TRCF_RID
AAA_14
T4SS
COG4_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
AVQ26463
UniProt:
A0AAD0MQI2
LinkDB
All DBs
Position
1305730..1307937
Genome browser
AA seq
735 aa
AA seq
DB search
MNLLEKLNEKQREAASQIDGSILILAGAGSGKTRTITYRIAHMIENIGISPYSILAVTFT
NKAAKEMRERVEDLVGEVAKSCTISTFHSFGMRLLRMYAAEVGYSPNFTIYDTDDQKRII
KAILKGQNITVNGNKLTERDLISIISKIKEEIKTIEEYSVMNKQIIEVYEKYNRSLIESN
AMDFSDILLNTYKLLQNSSILEKIQKKYKYIMIDEYQDTNNLQYKIIDLIARKSANLCVV
GDENQSIYGFRGANILNILNFENNYKNAKIIKLEENYRSTSTILDAANELIKNNKSSKDK
RLWTQNGKGDLIKVLVCDNARDEVSKIIDIIKENHQNGIPYKDMTILYRTNMQSRVFEEG
LLRYNIPHKVFGGISFYSRAEIKDIIAYLSIIVNPQDELNLQRIVNVPKRKVGEKGIEKI
IAFARENNLNLLDALSHIKDISGLTATGKEKLSEMYDIIKELKDLSYSETASYIVETLLD
KIKYIDYVKETYDDADARIENIEEFKNSILELENVVGVLRLSEYLENVSLVSATDDLEDE
KDYIKLMTIHNSKGLEFPIVFLVGFENEIFPGARASFDEKEMEEERRLCYVALTRAEKKL
YLSHTAIRFVYGQDRLATPSIFLKEIPEKLLDVEVKKERLYFEDDEFSDTRHSEKFKRFE
KKKTEINTKNTIVIPDDVKKVLDTLGFKIGDKVKHKKFGLGVIKKMDAKKIYVQYVDETR
EMAIILADKLLTKLD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
ttgaacttattagaaaaattaaatgagaaacaaagggaagcagcctcacaaattgacggt
tcgattttaattttagcaggagctggttctggaaaaacaagaacaattacatacagaata
gcacatatgatagaaaatattggaataagtccttatagtattttagcagtaacattcaca
aataaagctgctaaagaaatgagagaaagagttgaagaccttgtaggagaggttgcaaaa
tcttgtacaatttctaccttccactcgtttggaatgagacttttaagaatgtatgcagct
gaagtaggttacagtccaaactttactatatacgacacagatgaccaaaaaagaataata
aaagctatattaaaaggtcaaaatataactgtgaatggaaataaattgactgaaagagac
cttatttctataatttcaaaaataaaagaagaaataaaaactattgaagaatattcagtt
atgaacaagcaaattatagaagtttatgaaaaatataatagaagtttaatagaaagcaat
gctatggatttttcagatatacttttaaatacatataaattattacaaaactcttctata
cttgaaaaaattcaaaaaaaatataagtatataatgatagatgagtaccaagatacaaac
aatttacaatataaaattatagatttaatagcaagaaaatcagctaatttatgtgttgtt
ggagatgaaaaccaaagtatatatggatttagaggagcaaatatattaaatatccttaat
tttgaaaataactataagaatgctaaaataataaaattagaagaaaactatagatcaaca
agcactatactagatgctgctaatgaacttattaaaaataataaatcttctaaagataaa
agattatggacacaaaatggaaaaggagacttaatcaaggtcttagtttgtgacaatgca
agagatgaagtaagtaagattattgatataatcaaagaaaatcatcaaaatggtattcca
tataaagatatgacaattttatatagaactaatatgcaatcaagagtatttgaagaagga
cttttaagatataatatacctcataaagtctttggtggaattagtttctactctagagca
gaaattaaagatataattgcatatctatctattattgttaatccacaagatgaattaaat
ttacaaagaatagttaatgttcctaaaagaaaagttggggaaaaaggaattgaaaaaata
attgcttttgcaagagaaaataatcttaatttacttgatgcactttctcatataaaggac
atttcagggctaacagcaacaggaaaagaaaaactttctgaaatgtatgatataataaag
gaactgaaagatttatcttacagtgaaactgcctcatacatagttgaaactttactagat
aagataaaatatatagactatgtcaaagaaacttatgatgatgcagatgcaagaattgag
aatattgaagagtttaaaaactctattttagaattagaaaatgttgttggtgtattaaga
cttagtgagtatttagaaaatgtttcacttgtcagtgcaacagatgacttagaggatgaa
aaagactatataaaattgatgactatacacaactcaaaaggtctagaattccctatagtt
ttcttagtcggttttgaaaatgaaatcttcccaggtgcaagagcatcgtttgatgagaaa
gaaatggaagaagaaagaagactttgctatgttgccttaacgagagcagaaaagaagcta
tatttatctcatacagcaataagatttgtctatggtcaagatagactagcaactccttct
atatttttaaaagaaatacctgaaaaacttttagatgtagaagttaaaaaagaaagatta
tactttgaagatgacgaattttcagatacaagacattctgaaaagtttaagagatttgaa
aagaagaaaactgaaataaatacaaaaaatactattgtaattcctgatgatgtaaagaaa
gtattagatacattaggttttaaaataggcgataaagtaaaacataaaaaatttggttta
ggtgtcatcaaaaagatggatgctaaaaagatatatgttcaatatgttgatgaaacaaga
gaaatggctatcatactagctgataaacttttaactaaattggactag
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