Fusobacterium periodonticum: C4N17_06965
Help
Entry
C4N17_06965 CDS
T06291
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fpei
Fusobacterium periodonticum
Pathway
fpei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C4N17_06965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpei03021
]
C4N17_06965
03019 Messenger RNA biogenesis [BR:
fpei03019
]
C4N17_06965
Transcription machinery [BR:
fpei03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C4N17_06965
Messenger RNA biogenesis [BR:
fpei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C4N17_06965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
SAP_new25
AAA_25
Spore_III_AA
Tudor_RapA
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AVQ25458
UniProt:
A0AAD0MPL9
LinkDB
All DBs
Position
1411635..1412873
Genome browser
AA seq
412 aa
AA seq
DB search
MDILNKFLLKELQEIARIMDIEVSGQKKEELKALIIETLEENNTVLAYGVLDTAPEGFGF
LKETTLGKNIYMSASQVKKFKLRRGDLILGEVRNPIGEEKNFAIRRVLRVNDDDLNKIAD
RVPFEDLIPTYPREQIKLGLDHDNISGRILDLIAPIGKGQRSLIIAPPKAGKTTFISSIA
NAIIKGEKDIDVWILLIDERPEEVTDIKENVEGATVFASTFDDDPKNHIKVTEEIIERAK
MKVEDGENVVILLDSLTRLSRAYNIVIPSSGKLLSGGIDPMALYHPKNFFGAARNIKNGG
SLTIIATILVDTGSKMDEVIYEEFKSTGNCDIYLDRQLAEFRVFPAIDITRSGTRKEELL
LKKNQIEEIWNLRRLLNDYDNKVSSTAALIKAIKTTKNNDELLRQLPKVLYK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggatattttaaataaatttcttttaaaagagttgcaggagattgctagaattatggat
atagaggtttctgggcaaaaaaaagaagagttaaaagcactaataattgagacgcttgaa
gagaacaatactgttctcgcttatggagtactagacactgctcctgaaggttttggtttc
ttaaaggaaactacattaggtaaaaatatctatatgtcagcttcgcaagtaaaaaaattc
aaactgagaagaggagatcttattctaggtgaggttagaaatccaataggtgaggaaaag
aactttgctataagaagagttttaagagttaatgatgatgatttaaataaaatagctgat
agagttccttttgaggacttaattcctacttatcctagagaacaaatcaagttaggtttg
gatcatgataatatttcaggaagaatacttgatttaatagctccaattggaaaagggcaa
agatctttaataatagctcctccaaaagcaggtaaaacaacttttataagttctattgct
aatgctataataaagggtgaaaaagatattgatgtctggatattattaatagatgaaaga
cctgaagaagttacagatattaaggaaaatgtagaaggagcaactgtttttgcttcaaca
tttgatgatgatcctaagaatcatataaaagttacagaagaaataattgaaagagcaaag
atgaaagttgaagatggagaaaatgtagttatcctacttgactctttaacgagactttca
agagcatataatatagtgattccatcaagtggtaaactattatcaggaggtatagatcct
atggctctatatcatccaaagaacttttttggtgctgcaagaaatattaaaaatgggggt
agcttaactattatagctactatacttgtggatactggcagtaagatggatgaagttatc
tatgaagaatttaaatcaacaggaaactgtgatatctatttagatagacaattagctgaa
tttagagttttcccagctatagatatcacaagatctggaacaagaaaagaagaactactt
cttaaaaagaaccaaattgaagaaatttggaatttaagaagattactgaatgattatgac
aataaagtgagttcaacagcagctttaattaaggctataaaaacaacaaaaaataatgac
gaattattgagacagttacctaaggttctgtataaataa
DBGET
integrated database retrieval system
