Fusobacterium periodonticum: C4N17_07025
Help
Entry
C4N17_07025 CDS
T06291
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fpei
Fusobacterium periodonticum
Pathway
fpei03030
DNA replication
fpei03430
Mismatch repair
fpei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4N17_07025
03430 Mismatch repair
C4N17_07025
03440 Homologous recombination
C4N17_07025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpei03032
]
C4N17_07025
03400 DNA repair and recombination proteins [BR:
fpei03400
]
C4N17_07025
Enzymes [BR:
fpei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4N17_07025
DNA replication proteins [BR:
fpei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C4N17_07025
DNA repair and recombination proteins [BR:
fpei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C4N17_07025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
RecJ_OB
HHH_3
SSB
Motif
Other DBs
NCBI-ProteinID:
AVQ25469
UniProt:
A0AAD0HV36
LinkDB
All DBs
Position
complement(1421406..1424807)
Genome browser
AA seq
1133 aa
AA seq
DB search
MENNFVHLNLHTEYSLLEGVNSIDSFLTRAKELGMNSLAVTDYANMFCAIEFYEKAKKMG
IKPIIGLELPLYEKEEQNIFTLTLLAKDYEGYKNLVKLASELYKKKDNGELRISKGILKE
YSKGLIALSSSMKGEIGKAILMNFPSEKLDSIVDEYIEIFSKENFYLEIQANELPETKVI
NDKFYDLAKLKNIELVATNNVHYVDRDGYELQDIVICIQSGWKLKDKNRKRAVSKELYLK
SKEEMQRSLDERFHKAIENTNYIASLCNLEIEFGNLQFPYYEVPNQYSGMDEYLKSICYE
NIKKIYKENLTKDILERLEYELSVIIKMGYSGYFIVVWDFIAYAKRNGIPVGPGRGSAAG
SLVAYCLGITMIDPIRYNLLFERFLNPERISMPDIDIDICRERRDELIDYVVHKYGRERV
AHIITFGRMKARAAIRDIGRVLDIDLKKIDRLSKLVSSFQTLEKTLKENVEVAKLYTTDI
ELQKVIDLSIRIENKIRHVSTHAAGILITKEDLDRTVPIYLDEKEGVIATQYQMKELEDL
GLLKIDFLGLKNLSNIQRTIDYIKKYKNIDIELYKIPLDDKKVFEMLSQGDSTGVFQLES
TGIRKIMKRLKPNKLEDIVALLALYRPGPLQSGMVDDFINRKNGKEKIEYPHKNLEIILK
ETYGVILYQEQVMKIASYMANYSLGEADLLRRAMGKKNFTIMRENREKFIQRAVENNYTE
EKADEIFELIDKFAGYGFNKSHSVAYAMISYWTAYLKAHYPAFYFAAIMTSEISETGDVA
YYFNDAKEHRISIYPPNVNTPSAYFEIKNDGISYSLAAIKNLGLNLAKKIVEDYEKYGAY
TKLDEFVLRNKKNGMNKRALEALILSGALDELEGNRKEKFLSIDKVLDFVSKAPKTDEIQ
QMNLFGAASKTIDKFVLTNSEDFSLDEKLTKEKEFLGFYLSSHPLDKYRDIVTIFSINKL
SEIDMEETKVLKTFGTIMGLKKLLTKKDEQMALFSILCYDRVISCIAFPKTYEKFLEEII
EKKTVYVEGKIQIDEYKGEKTTKLLIEKIISLDKLYDYPAKKLFVLIEEEDRYKYSRLRE
LINSNKGNTDFIFAIKNKNEKRIQNTGTKVKLNREFLEQLVELMGIEKIKIQM
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggagaataattttgttcatttgaatttacatactgaatatagccttttagaaggtgta
aatagcatagatagttttttaacaagagcaaaagaattaggtatgaactctttggctgtg
acagactatgccaatatgttctgtgctattgaattctatgaaaaggctaagaagatggga
attaaaccaattattggtttagaacttccactttatgaaaaagaagagcaaaatattttt
accttgactttgcttgcaaaagattatgaaggctataaaaatttagtaaaattagcctct
gaactatataagaaaaaagataatggagaactaagaataagtaaagggatattaaaagaa
tatagcaagggcttgatagcactttcttcttctatgaagggagaaatagggaaggcaatt
ttaatgaatttccctagtgagaaacttgatagtatagttgatgaatacatagaaatattt
tcaaaagagaatttttatttagagatacaagctaatgaacttcctgagacaaaagtaatc
aatgataaattctatgacttagcaaagttgaaaaatatagaattagtggcaaccaataat
gttcattatgttgatagagacggttatgagttacaagacatagtgatttgtatacagtca
ggttggaagcttaaagataaaaatagaaaaagagctgtatcaaaagaattgtatttaaaa
tcaaaagaagaaatgcaaagaagcctagatgaaagatttcataaagctatagaaaacacc
aactatatagccagtttatgtaatttagaaatagaatttggaaatttacagttcccatat
tacgaagttcctaatcaatattcaggaatggatgaatatttaaaatctatatgttacgaa
aacatcaaaaaaatatataaagaaaatctaaccaaagatatcttagaaaggcttgaatat
gaactctcggttattataaaaatgggatattcaggatactttatagtagtttgggacttt
atagcctatgctaagagaaatggtatacctgttggaccgggaagaggttcagcagcagga
agtttagttgcctactgtctaggaataactatgatagatcctataaggtataacttactt
tttgaaagatttttaaatcctgaaagaatatctatgcccgatattgatatagatatctgt
cgtgaaagacgtgatgagcttatagactatgttgtgcataaatatggaagggaaagagtt
gcccatattataacctttggtagaatgaaagcaagggcagcaataagagatataggtaga
gttttagatattgatttgaaaaaaatagacaggttgagtaaattagtttcttcttttcaa
actttagaaaaaactttaaaagaaaatgtagaagttgcaaaattatatacaacagatatt
gaattacaaaaggtaatagatctatcaataagaattgaaaataagataagacatgtatct
acccatgcagctggtatccttataactaaagaagacttagatagaacagttcctatttac
ttagatgaaaaagaaggagttatagcaactcaatatcaaatgaaagagcttgaagatcta
gggcttttaaaaatagatttcctaggtttaaaaaatctttctaatatacaaagaacaata
gactatattaaaaaatataaaaatatagatatagaactatataaaattccacttgatgat
aaaaaggtttttgaaatgctatcacaaggagattcaacaggagtttttcagttagagtca
acaggaattagaaaaataatgaagagattaaaaccaaataaactagaggatatagtggca
ctattggctctatatagaccaggacctttgcagtcaggaatggttgatgattttatcaat
agaaaaaatggtaaagagaaaatagaatatccacataagaatttggaaataattttaaaa
gaaacttatggagtaattctctatcaagaacaggttatgaaaatagcaagttatatggca
aactatagtcttggcgaagcagacttattaagacgggctatggggaaaaagaactttacc
ataatgagagaaaatagagagaagtttattcagagggcagttgagaataattatactgaa
gagaaagctgacgaaatatttgaattaatagataagtttgcaggttatggtttcaataaa
tctcactctgtagcctatgctatgatttcatattggacagcttacttaaaggcacattat
cctgctttctattttgctgctattatgacttcagaaatatctgaaacaggtgatgttgca
tattactttaatgatgcaaaagagcatagaataagtatatatccgcctaatgtaaatact
ccaagtgcatattttgaaataaaaaatgatggaataagctattctttagctgcaattaaa
aatcttggcttaaatctagcaaagaaaattgtggaagattatgaaaaatatggtgcttat
acaaaattagatgaatttgtacttagaaacaaaaaaaatggaatgaataaaagagcccta
gaagctttaattttatcaggagctttagatgagttagaaggtaatagaaaggaaaaattc
ctatcaatagataaggtacttgactttgtttcaaaagctccaaaaacagatgaaattcaa
cagatgaatctctttggagcagcaagtaaaactatagataaatttgttttaaccaatagt
gaagactttagtctagatgaaaagttgactaaggaaaaagagtttttaggtttctactta
agttcacatcctttggataaatacagggatatagttacaattttttctataaataagctt
tcagaaatagatatggaagaaactaaagttttaaaaacatttggaactatcatgggtcta
aaaaaacttttaactaaaaaagatgaacagatggctttattctctattctttgttatgat
agagtgatatcttgtatagcttttcctaagacttatgaaaaatttttagaagaaataata
gagaaaaaaacagtctatgttgaaggtaaaatacagatagatgagtataagggtgaaaaa
actactaaactacttatagaaaaaataatttctttagataagctatatgactatcctgct
aaaaaactatttgttttaattgaagaagaggataggtataaatatagtagacttagagaa
ttaattaattctaataaaggtaatacagattttatatttgctataaaaaataagaatgaa
aaaagaattcaaaatacaggtacaaaagtaaaacttaatagagaatttttagagcaatta
gttgaacttatgggaatagaaaagataaaaattcaaatgtaa
DBGET
integrated database retrieval system
