Fusobacterium periodonticum: C4N17_08600
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Entry
C4N17_08600 CDS
T06291
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fpei
Fusobacterium periodonticum
Pathway
fpei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C4N17_08600 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpei03019
]
C4N17_08600 (pnp)
03016 Transfer RNA biogenesis [BR:
fpei03016
]
C4N17_08600 (pnp)
Enzymes [BR:
fpei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C4N17_08600 (pnp)
Messenger RNA biogenesis [BR:
fpei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C4N17_08600 (pnp)
Transfer RNA biogenesis [BR:
fpei03016
]
Prokaryotic type
tRNA degradation factors
C4N17_08600 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
SAC3
Xpo1
Motif
Other DBs
NCBI-ProteinID:
AVQ25731
LinkDB
All DBs
Position
1728113..1730224
Genome browser
AA seq
703 aa
AA seq
DB search
MKNLMFDEKIMELELAGRTLKVSTGKISRQSSGAIVIQYGDTVILSTANRSKEARKGADF
FPLTVDYVEKFYSTGKFPGGFNKREGRPSTNATLIARLIDRPIRPMFPEGFNYDVHIVNT
VLSYDEVNTPDYLGIIGSSLALMISDIPFLGPVAGVTVGYKNGEFILNPSPAELEESELD
LSVAGTKDAVNMVEAGAKELDEETMLKAIMFAHDNIKKICEFQEVFAKLYGKENIEFTKE
EVLPLVKDFIDTNGHKRLQEAVLTTGKKNREEAVDSLEEELLNKFIGENYPDVPEEELPE
DVITEFKTYYHDLMKKLVREAILYHKHRVDGRTTTEIRPLDAQINVLPIPHGSALFTRGE
TQSLAITTLGTKADEQLIDDLEKEYYKKFYLHYNFPPYSVGEVGRMGSPGRRELGHGSLA
ERALRYVIPSEEEFPYTIRVVSEITESNGSSSQASICGGSLSLMSAGVPIKEHVAGIAMG
LIKEGEEFTVLTDIMGLEDHLGDMDFKVAGTKSGITALQMDIKITGITEEIMRIALNQAH
EARQQILELMNNTISKPAELKSNVPRIQQITIPKDKIAVLIGPGGKNIKSIIDQTGATVD
ITDDGLVSVFAQDAEVLEKTLKLIDSFVREVEYNEVYEGRVVSIMKFGAFMEILPGKEGL
LHISEISPERVEKVEDVLSVGDVFKVRVISMEGGKISLSKKKV
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaatttaatgtttgatgaaaaaattatggagctagagcttgctggaagaacttta
aaagtttctactggtaaaatctctagacaatctagtggagctattgttattcaatacggt
gatacagtaattttatctactgctaaccgtagtaaagaagctagaaagggagctgacttt
ttccctttaactgttgactatgtagaaaaattctattctactggtaaatttcctggaggt
tttaacaaaagagaaggaagaccttcaacaaatgctactttgatagctagacttattgat
agaccaataagaccaatgtttcctgaaggtttcaactatgatgtacatattgttaataca
gttctatcatatgatgaagtgaatacacctgattacttaggtataattggttcttcactt
gcacttatgatttctgatattccattcttaggacctgttgcaggggttacagttggatat
aaaaatggagaatttattttaaatccttctcctgctgaattggaagaaagtgaacttgac
ctttctgttgcaggaacaaaagatgctgtaaacatggttgaagcaggagcaaaagaatta
gatgaagaaactatgttaaaagctattatgttcgcacatgacaacatcaaaaaaatctgt
gaatttcaagaagtttttgctaaattatatggaaaagaaaatatagaatttacaaaagaa
gaagtcttacctcttgttaaagacttcatcgatacaaatggacacaaaagattacaagaa
gctgtattaactacaggtaagaaaaatagagaagaagctgttgattctttagaagaagaa
ttattaaataaattcataggagaaaattatcctgatgttcctgaagaagaattaccagaa
gatgtaattactgaatttaaaacttactaccatgatttaatgaaaaaattagtgagagaa
gctatactatatcataaacatagagttgatggaagaactactacagaaattagaccttta
gatgctcaaattaatgttttacctattccacatgggtcagctctatttacaagaggagaa
actcaatctcttgctataactacattaggaactaaagctgatgaacaattgatagatgat
ttagaaaaagaatattataaaaaattctatctacactataacttcccaccatactcagtt
ggagaagttggaagaatgggttcacctggaagaagagaattaggacatggttcacttgct
gaaagagctttaagatatgttatccctagtgaagaagaattcccttatactataagagtt
gtttctgaaataacagaatctaatggttcatcttctcaagcttctatctgtggaggttca
ttatcacttatgtctgctggagttcctataaaagaacatgttgcaggtatagctatggga
cttatcaaagaaggagaagaattcactgttttaacagatataatgggacttgaagaccac
ttaggagatatggactttaaagttgctggtactaaatctggtatcacagctctacaaatg
gatattaaaatcacaggtataactgaagaaatcatgagaattgctttaaatcaagctcat
gaagctagacaacaaatattagaacttatgaataatacaatttctaaacctgctgaatta
aaatctaatgtacctagaattcaacaaatcactattccaaaagacaagattgctgttctt
attggaccaggtggaaaaaatattaaaagtatcatagatcaaacaggtgctactgttgat
ataacagatgatggacttgtatctgttttcgctcaagatgctgaagttttagaaaagact
ttaaaacttatagattcttttgttagagaagttgaatacaacgaagtttatgaaggtcgt
gttgtttctataatgaaatttggtgcatttatggaaattttacctggtaaagaaggttta
ctacatatatctgaaatctctcctgaaagagtggaaaaagttgaagacgtactttcagtt
ggagatgttttcaaagttagagttatttctatggaaggtggaaaaatctctttaagtaag
aaaaaagtttaa
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