Floricoccus penangensis: KIW23_03160
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Entry
KIW23_03160 CDS
T08197
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fpen
Floricoccus penangensis
Pathway
fpen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KIW23_03160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpen03019
]
KIW23_03160
03009 Ribosome biogenesis [BR:
fpen03009
]
KIW23_03160
Enzymes [BR:
fpen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KIW23_03160
Messenger RNA biogenesis [BR:
fpen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KIW23_03160
Ribosome biogenesis [BR:
fpen03009
]
Prokaryotic type
rRNA helicases
KIW23_03160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
GRP
NAT10_TcmA_helicase
RAM
Motif
Other DBs
NCBI-ProteinID:
URZ88045
LinkDB
All DBs
Position
684270..685847
Genome browser
AA seq
525 aa
AA seq
DB search
MNFNELGLSEDILSAVTKAGFETPSPIQEGTIPLAIAGRDVIGQAQTGTGKTAAFGLPTL
DKIDVNGGIQALVIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIEKQIKGLKSGTH
IVVGTPGRLLDLIRRRALKLDQVKVLVLDEADEMLNMGFLEDIEDIIKSVPNERQTLLFS
ATMPDAIKRIGVKFMTNPEHVKVAAKEMTADNIEQFYIRTKEFEKFDVLTRLLDVERPEL
AIIFGRTKRRVDELTRGLKLLGYRAEGIHGDLAQQKRLSVLRDFKGDNLDILVATDVAAR
GLDISGVTHVYNYDITQDQESYVHRIGRTGRAGKSGQSITFVTNNEMGYLKAIENLTKKE
MIGMRPPTKDEAYKASLSVAFDEINRDLADEKLVSKLGKFDEDAQKLLEKYSAEELVALL
LQAKVKDPDSQPKVEIAAEKPLPFNGTGGKGGGGGRSRNNRGGGNRNGGNRNGGNRRNGG
YKGKNDRNDRNNDKKKGYYSNDKKKSHPKASEKKPGFVMRNRGDK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaatgaattaggactgtcagaagacattctgtcagcagttacaaaagcaggt
tttgaaacaccatcacctattcaagaaggaactattcctttagcaatcgcaggacgcgac
gttattggacaagctcaaacgggtactggtaaaactgcagcctttggacttcctactctt
gataaaattgacgtaaatggtggtattcaagcattagtaatcgcacctacacgtgaatta
gcagtacaatcgcaagaagaattattccgtttcggacgtgataaaggcgttaaagtacgc
tcagtatatggtggttcaagcatcgaaaaacaaattaaaggacttaaatctggtactcat
attgttgttggtactccaggtcgtcttttagacttaatccgtcgtcgtgctcttaaactt
gaccaagttaaagtacttgttcttgatgaagcagatgaaatgcttaacatgggattcttg
gaagatatcgaagatatcatcaagagcgttccaaatgaacgtcaaactttacttttctca
gctacaatgcctgatgcaatcaaacgtattggtgttaagttcatgactaatcctgaacac
gtaaaagtagctgctaaagaaatgacagcagataacattgaacaattttacattcgtact
aaagaatttgaaaaatttgatgttcttactcgtcttcttgacgttgaacgtcctgagctt
gcaatcatcttcggtcgtactaaacgtcgtgtagatgaacttactcgtggacttaaactt
ctaggataccgtgcagaaggtattcacggagacttagcacaacaaaaacgtctaagtgtt
ttacgtgactttaaaggtgataaccttgatatcttagtagcaactgacgttgctgcgcgt
ggacttgatatttcaggtgtaactcacgtttataactatgatattactcaagaccaagaa
tcatacgttcaccgtattggtcgtacaggtcgtgctggtaaatcaggtcaatcaatcact
ttcgttactaataacgaaatgggttaccttaaagccattgaaaacttaactaagaaagaa
atgattggtatgcgtcctcctactaaggatgaagcatacaaagctagcctttcagtagct
tttgatgaaattaaccgtgatcttgctgacgaaaaattagtaagcaaacttggaaaattt
gatgaagatgctcaaaaacttcttgaaaaatattcagcagaagaacttgttgctttgctt
ttacaagctaaagtaaaagatccagatagccaacctaaggttgaaattgctgctgaaaaa
ccacttcctttcaacggaacaggcggtaaaggtggcggcggtggtcgctcacgtaataat
cgtggtggtggaaatcgtaatggcggaaaccgcaacggtggaaatcgtcgtaacggtggt
tacaaaggtaaaaatgatcgtaacgatcgtaacaacgacaagaaaaaaggctactactca
aacgacaagaaaaaatcacaccctaaagcatcagaaaagaaacctggtttcgtgatgcgt
aatcgtggtgataaataa
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